RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ZIK1Q3SY52 487 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 HSP90AA5PQ58FG0 334 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 NHSL2Q5HYW2 709 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ADGRF1Q5T601 910 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARHGAP40Q5TG30 622 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 WDR73Q6P4I2 378 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRMT10BQ6PF06 316 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RPTNQ6XPR3 784 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ADCK2Q7Z695 626 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC15A3Q8IY34 581 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYCP3Q8IZU3 236 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SVOPQ8N4V2 548 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 DPP10Q8N608 796 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ANKRD53Q8N9V6 530 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PSD4Q8NDX1 1056 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC35B2Q8TB61 432 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SHKBP1Q8TBC3 707 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CNOT9Q92600 299 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZKSCAN4Q969J2 545 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM149B1Q96BN6 582 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTERQ96BW5 349 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAR2Q96K12 515 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TSGA13Q96PP4 275 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRAM1Q96QH2 718 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TLR10Q9BXR5 811 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 C1orf21Q9H246 121 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 POLR1BQ9H9Y6 1135 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNFRSF12AQ9NP84 129 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 THAP1Q9NVV9 213 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARHGEF38Q9NXL2 777 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RABL2AQ9UBK7 228 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CACNG4Q9UBN1 327 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLCO3A1Q9UIG8 710 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 FBXL5Q9UKA1 691 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CPSF3Q9UKF6 684 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 VWA7Q9Y334 891 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 NEU2Q9Y3R4 380 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PCDHB2Q9Y5E7 798 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 GOLGA6L10A0A0M3HER8 536 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 LRRD1A4D1F6 860 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 A4D1N5 150 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 MBD3L5A6NJ08 208 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 LRRC53A6NM62 1247 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 NOTOA8MTQ0 251 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 KCNJ18B7U540 433 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 TEX22C9J3V5 150 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 E9PLN8 166 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PLOD2O00469 737 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CAPN9O14815 690 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PER2O15055 1255 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 DCLK1O15075 740 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 SEC22BO75396 215 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 TADA2AO75478 443 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 SLC22A3O75751 556 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PNPP00491 289 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 JUNP05412 331 aaKnown RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 DLDP09622 509 aaKnown RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 SLURP2P0DP57 97 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CYP2C8P10632 490 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CDH2P19022 906 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 ITGALP20701 1170 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 KCNA3P22001 575 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PBX1P40424 430 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCR10P46092 362 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 GSK3AP49840 483 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 GZMKP49863 264 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 BMXP51813 675 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 POLGP54098 1239 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CSE1LP55060 971 aaKnown RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 FAM3BP58499 235 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 ERVFC1P60507 584 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 EFNB1P98172 346 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CEBPZQ03701 1054 aaKnown RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 SLC14A1Q13336 389 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 RUNX2Q13950 521 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCNIQ14094 377 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 E2F2Q14209 437 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 KCNJ12Q14500 433 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PCLAFQ15004 111 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 MORF4L2Q15014 288 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 PCOLCEQ15113 449 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 MPP7Q5T2T1 576 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 OLFML2BQ68BL8 750 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 RGS7BPQ6MZT1 257 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCDC144NLQ6NUI1 221 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 TAPT1Q6NXT6 567 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 TSSK4Q6SA08 328 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 TMEM108Q6UXF1 575 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 OTOAQ7RTW8 1153 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 SLC46A3Q7Z3Q1 461 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 GLRX5Q86SX6 157 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 NLRX1Q86UT6 975 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 KBTBD6Q86V97 674 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 HOOK3Q86VS8 718 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 NPAS3Q8IXF0 933 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 KLHL7Q8IXQ5 586 aa3.83□□□□□ -1.8
HMGB1P22-201ENST00000505315 FAM185AQ8N0U4 392 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms