RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 CNDP2Q96KP4 475 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 SFMBT1Q9UHJ3 866 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 M0QYV0 167 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 O00370 1275 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 CD27P26842 260 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 ACSL1P33121 698 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 KCNC4Q03721 635 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 HES3Q5TGS1 186 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 BSPRYQ5W0U4 402 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 PM20D1Q6GTS8 502 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 CPXM2Q8N436 756 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 BIRC7Q96CA5 298 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 WBP1Q96G27 269 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 DHTKD1Q96HY7 919 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 ELOVL2Q9NXB9 296 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 MAN1B1Q9UKM7 699 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-213ENST00000505074 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 YJEFN3A6XGL0 299 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 E7ENQ6 273 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 MSI1O43347 362 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 FSBPO95073 299 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 SEMA4FO95754 770 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 PRKCHP24723 683 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 PPP1R2P41236 205 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 C21orf59P57076 290 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 RHDQ02161 417 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 DNAJC3Q13217 504 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 EIF4HQ15056 248 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 MPPE1Q53F39 396 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 SERPINA13PQ6UXR4 307 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 GATAD2AQ86YP4 633 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 SPACA3Q8IXA5 215 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 SORCS1Q8WY21 1168 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 BTBD1Q9H0C5 482 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 ABCC13Q9NSE7 274 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 KIAA1257Q9ULG3 409 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 CLEC4EQ9ULY5 219 aa16.66■□□□□ 0.26
PDLIM7-213ENST00000505074 B8ZZF3 427 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 CBX4O00257 560 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 BIN1O00499 593 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 BRINP1O60477 761 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 ITGAVP06756 1048 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 PAEPP09466 180 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 ABCB4P21439 1286 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 DAOAP59103 153 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 TRIP4Q15650 581 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 KCNT1Q5JUK3 1230 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 LGMNQ99538 433 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 SLC2A11Q9BYW1 496 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 CNGB3Q9NQW8 809 aa16.65■□□□□ 0.26
PDLIM7-213ENST00000505074 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 VILLO15195 856 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 CALCAP01258 141 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 ACADVLP49748 655 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 KCNH2Q12809 1159 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 BROXQ5VW32 411 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 RRAGAQ7L523 313 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 UBR7Q8N806 425 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 RBBP8NLQ8NC74 664 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 TFAP2BQ92481 460 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 KAT5Q92993 513 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 TMA16Q96EY4 203 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 ELF4Q99607 663 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 MIS12Q9H081 205 aa16.64■□□□□ 0.25
PDLIM7-213ENST00000505074 TIMM44O43615 452 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 STX17P56962 302 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 TMPRSS3P57727 454 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 ZNF445P59923 1031 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 RACK1P63244 317 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 STILQ15468 1287 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 TBC1D25Q3MII6 688 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 ADGRF1Q5T601 910 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 PMF1Q6P1K2 205 aa16.63■□□□□ 0.25
PDLIM7-213ENST00000505074 CHST9Q7L1S5 443 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms