RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 RBP3P10745 1247 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 NCAM1P13591 858 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 VHLP40337 213 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 DEUP1Q05D60 604 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 MAPRE1Q15691 268 aaKnown RBP13.62□□□□□ -0.23
CCSER1-205ENST00000505073 DPYSL2Q16555 572 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
CCSER1-205ENST00000505073 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
CCSER1-205ENST00000505073 FAM171A1Q5VUB5 890 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCSER1-205ENST00000505073 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 TAB3Q8N5C8 712 aaPredicted RBP13.62□□□□□ -0.23
CCSER1-205ENST00000505073 PLD5Q8N7P1 536 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 LRRN4Q8WUT4 740 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 NT5C3BQ969T7 300 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 PIGVQ9NUD9 493 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 ZFP69BQ9UJL9 534 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 GRID1Q9ULK0 1009 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 LRCH1Q9Y2L9 728 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 HEY1Q9Y5J3 304 aa13.62□□□□□ -0.23
CCSER1-205ENST00000505073 APOL1O14791 398 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 OAZ2O95190 189 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 CXCL10P02778 98 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 GRIK1P39086 918 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 MAGEA4P43358 317 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 NOMO1Q15155 1222 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 CRIPAKQ8N1N5 446 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 ZNF670Q9BS34 389 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 DLGAP2Q9P1A6 1054 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 FZD10Q9ULW2 581 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 TANC1Q9C0D5 1861 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 ALDH2P05091 517 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 GCAP28676 217 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SDHAF4Q5VUM1 108 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 C4orf50Q6ZRC1 276 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 BNIPLQ7Z465 357 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
CCSER1-205ENST00000505073 TDRPQ86YL5 185 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 FAM71DQ8N9W8 422 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 PGLYRP2Q96PD5 576 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SMC6Q96SB8 1091 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
CCSER1-205ENST00000505073 FOXP3Q9BZS1 431 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 ZCWPW1Q9H0M4 648 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 PIDD1Q9HB75 910 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCSER1-205ENST00000505073 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 MFHAS1Q9Y4C4 1052 aa13.61□□□□□ -0.23
CCSER1-205ENST00000505073 H7C0C1 242 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 GOT1P17174 413 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ATP5OP48047 213 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 RPS6KA3P51812 740 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 DARS2Q6PI48 645 aaKnown RBP13.6□□□□□ -0.23
CCSER1-205ENST00000505073 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ZCCHC9Q8N567 271 aaKnown RBP13.6□□□□□ -0.23
CCSER1-205ENST00000505073 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 RBM15Q96T37 977 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCSER1-205ENST00000505073 PCDH9Q9HC56 1237 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 C2CD2LO14523 706 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 DNALI1O14645 258 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-205ENST00000505073 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-205ENST00000505073 AMPD1P23109 780 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 GPR15P49685 360 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 SLC5A3P53794 718 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ARPP19P56211 112 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 SESN3P58005 492 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ROR1Q01973 937 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 CCDC6Q16204 474 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 BSPRYQ5W0U4 402 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 SLC9A4Q6AI14 798 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 IFT43Q96FT9 208 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 CSPG4P5Q96PW8 444 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 MIPEPQ99797 713 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ANLNQ9NQW6 1124 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ETNK2Q9NVF9 386 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 SCOCQ9UIL1 159 aa13.6□□□□□ -0.23
CCSER1-205ENST00000505073 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
CCSER1-205ENST00000505073 SYN3O14994 580 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 AMHP03971 560 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 GALTP07902 379 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 RPA3P35244 121 aaPredicted RBP13.59□□□□□ -0.23
CCSER1-205ENST00000505073 OCRLQ01968 901 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
CCSER1-205ENST00000505073 FYB2Q5VWT5 728 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 PM20D1Q6GTS8 502 aa13.59□□□□□ -0.23
CCSER1-205ENST00000505073 OTOAQ7RTW8 1153 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms