RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 KDELR1P24390 212 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 GJA4P35212 333 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NDST2P52849 883 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 HSF5Q4G112 596 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 RTL3Q8N8U3 475 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 HJURPQ8NCD3 748 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 ALG3Q92685 438 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 TSGA13Q96PP4 275 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 GABRG3Q99928 467 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 DDX50Q9BQ39 737 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 HERPUD2Q9BSE4 406 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 TRMT61BQ9BVS5 477 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 APOL5Q9BWW9 433 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 C11orf16Q9NQ32 467 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 DUS2Q9NX74 493 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 HOXA6P31267 233 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CA8P35219 290 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 MAGEA9P43362 315 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CDR1P51861 262 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NUBP1P53384 320 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 PFKPQ01813 784 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 PTPRNQ16849 979 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CC2D1AQ6P1N0 951 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 SYCE1Q8N0S2 351 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 RTP4Q96DX8 246 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 DEF6Q9H4E7 631 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 FAM204AQ9H8W3 233 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 GOLGA6L7A0A1B0GV03 622 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NPC1O15118 1278 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 KRT7P08729 469 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 ABCB4P21439 1286 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CYP1B1Q16678 543 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NCBP2-AS2Q69YL0 99 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 FSTL4Q6MZW2 842 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 DRICH1Q6PGQ1 229 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMEM25Q86YD3 366 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 PLD5Q8N7P1 536 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CSPG4P5Q96PW8 444 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMEM245Q9H330 911 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 THG1LQ9NWX6 298 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 INTS6Q9UL03 887 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 CLEC4EQ9ULY5 219 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 AP4E1Q9UPM8 1137 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZKSCAN5Q9Y2L8 839 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 PCDH15Q96QU1 1955 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 hCG_1818297A0A087WSY0 165 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 A0A1B0GVM2 712 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ILVBLA1L0T0 632 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 TCAF2A6NFQ2 919 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 LRIG2O94898 1065 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 SLC11A2P49281 568 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 HARS2P49590 506 aaKnown RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 GAD2Q05329 585 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 GALNT2Q10471 571 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CCDC105Q8IYK2 499 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CPA6Q8N4T0 437 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PRMT8Q9NR22 394 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 MYO1FO00160 1098 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ADH5P11766 374 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ITPRIPL2Q3MIP1 535 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 DENND1CQ8IV53 801 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PCDH19Q8TAB3 1148 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 SYNCQ9H7C4 482 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ARHGEF4Q9NR80 690 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 NUDT5Q9UKK9 219 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 NEU2Q9Y3R4 380 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 KRT86O43790 486 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CLDN11O75508 207 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PALMO75781 387 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 IGLV3-19P01714 112 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CKMP06732 381 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CTHP32929 405 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PRKD1Q15139 912 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 TRIM58Q8NG06 486 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 WFIKKN2Q8TEU8 576 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 KRT35Q92764 455 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CARD9Q9H257 536 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 LSM7Q9UK45 103 aaKnown RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 HS3ST2Q9Y278 367 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 TRIOO75962 3097 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 ADH1CP00326 375 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 APOEP02649 317 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 CHRNB1P11230 501 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 MARCKSL1P49006 195 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 SIGLEC14Q08ET2 396 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 MESP2Q0VG99 397 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 KIF5AQ12840 1032 aa8.54□□□□□ -1.04
CDC42SE2-208ENST00000505065 MLF2Q15773 248 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms