RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 KLHL17Q6TDP4 642 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PIWIL4Q7Z3Z4 852 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NIM1KQ8IY84 436 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 KBTBD7Q8WVZ9 684 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 MRI1Q9BV20 369 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 GRIP2Q9C0E4 1043 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 CDC42EP4Q9H3Q1 356 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 GAREM1Q9H706 876 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 A3GALT2U3KPV4 340 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 UCHL3P15374 230 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 LIG4P49917 911 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NAA30Q147X3 362 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SPANXN3Q5MJ09 141 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ZCCHC8Q6NZY4 707 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 RAD9BQ6WBX8 426 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 CCDC81Q6ZN84 652 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 C15orf52Q6ZUT6 534 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ZNF598Q86UK7 904 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 HIPK1Q86Z02 1210 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PTCD2Q8WV60 388 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 COPS7BQ9H9Q2 264 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 KCNE2Q9Y6J6 123 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ATRNO75882 1429 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ERVV-2B6SEH9 535 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 EDF1O60869 148 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PRKD3O94806 890 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 MBD4O95243 580 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 FCER2P06734 321 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 HOXD12P35452 270 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NFX1Q12986 1120 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 FAM160B1Q5W0V3 765 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PHC3Q8NDX5 983 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 AURKBQ96GD4 344 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SLC39A8Q9C0K1 460 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TBC1D22BQ9NU19 505 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 CYB5R1Q9UHQ9 305 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NEURL1BA8MQ27 555 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 MTHFD1P11586 935 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SLC1A4P43007 532 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 DUS1LQ6P1R4 473 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 CLNKQ7Z7G1 428 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PPM1KQ8N3J5 372 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 AMNQ9BXJ7 453 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TRIM49BA6NDI0 452 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TRIM49D1C9J1S8 452 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 FCHO1O14526 889 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NARSO43776 548 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 TLL1O43897 1013 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 CYP1A2P05177 515 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PTPN2P17706 415 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 STOMP27105 288 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PRCPP42785 496 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PLD1Q13393 1074 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PPP1R15BQ5SWA1 713 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 RNF219Q5W0B1 726 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ERICH5Q6P6B1 374 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 DRICH1Q6PGQ1 229 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SLC35G2Q8TBE7 412 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SPIRE2Q8WWL2 714 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 EIF3LQ9Y262 564 aaKnown RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PLEKHA6Q9Y2H5 1048 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 C3P01024 1663 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ZNF879B4DU55 563 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 GLDCP23378 1020 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SYDE2Q5VT97 1194 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 IDO2Q6ZQW0 420 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 C16orf71Q8IYS4 520 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 ELMOD1Q8N336 334 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 OSBP2Q969R2 916 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SLITRK2Q9H156 845 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.2□□□□□ -1.42
LINC02397-201ENST00000504409 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
LINC02397-201ENST00000504409 PSAPP07602 524 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 WEE2P0C1S8 567 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 RBM34P42696 430 aaKnown RBP6.19□□□□□ -1.42
LINC02397-201ENST00000504409 USP46P62068 366 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 MRPS22P82650 360 aaKnown RBP6.19□□□□□ -1.42
LINC02397-201ENST00000504409 MAB21L1Q13394 359 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 RBFAQ8N0V3 343 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 DCAF4Q8WV16 495 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 VPS28Q9UK41 221 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 LAMB1P07942 1786 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 UTYO14607 1347 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 SALL1Q9NSC2 1324 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 B4E1Z4 1266 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 NCAM1P13591 858 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 CTPS1P17812 591 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 FGFR4P22455 802 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 PPM1FP49593 454 aaPredicted RBP6.19□□□□□ -1.42
LINC02397-201ENST00000504409 CDC42P60953 191 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 SLC9A4Q6AI14 798 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 ANO7Q6IWH7 933 aa6.19□□□□□ -1.42
LINC02397-201ENST00000504409 MMAAQ8IVH4 418 aaKnown RBP6.19□□□□□ -1.42
LINC02397-201ENST00000504409 TGFBRAP1Q8WUH2 860 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms