RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ENO1P06733 434 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SP1P08047 785 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 NEFHP12036 1026 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 MYF5P13349 255 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 DRD1P21728 446 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 HOXA11P31270 313 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC8A1P32418 973 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 IGHMBP2P38935 993 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ROR2Q01974 943 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SEMA3BQ13214 749 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 BFSP2Q13515 415 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 POLD3Q15054 466 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ODF3L2Q3SX64 289 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ANXA2RQ3ZCQ2 193 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 MINDY4Q4G0A6 757 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 RNF220Q5VTB9 566 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 PPP4R4Q6NUP7 873 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 DARS2Q6PI48 645 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 DHRS13Q6UX07 377 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 LRIG3Q6UXM1 1119 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 RNF44Q7L0R7 432 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ANKRD23Q86SG2 305 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SESTD1Q86VW0 696 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 RHPN2Q8IUC4 686 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 DDIASQ8IXT1 998 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SMAP1Q8IYB5 467 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 FAM47BQ8NA70 645 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 OR52L2PQ8NGH6 319 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 TMEM174Q8WUU8 243 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 EME1Q96AY2 570 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZNF845Q96IR2 970 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 MSLNLQ96KJ4 702 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 PCGF6Q9BYE7 350 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 AAMDCQ9H7C9 122 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 METTL14Q9HCE5 456 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 HEYLQ9NQ87 328 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 RXFP3Q9NSD7 469 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 TBC1D23Q9NUY8 699 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZIM2Q9NZV7 527 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 UTS2RQ9UKP6 389 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC8A2Q9UPR5 921 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 THRAP3Q9Y2W1 955 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 ANKRD62A6NC57 917 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 A6NNC1 897 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 RHODO00212 210 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 IFNA2P01563 188 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 CHRNB1P11230 501 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 RPL17P18621 184 aaKnown RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 CIITAP33076 1130 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 COPB2P35606 906 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 PEX19P40855 299 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 AGTR2P50052 363 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF84P51523 738 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 GPS1Q13098 491 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 GAB1Q13480 694 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 RBM39Q14498 530 aaKnown RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 PGM5Q15124 567 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 CDC37Q16543 378 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF718Q3SXZ3 478 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF672Q499Z4 452 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ARHGAP29Q52LW3 1261 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 INO80DQ53TQ3 878 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 TTLL5Q6EMB2 1281 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 WBP2NLQ6ICG8 309 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 PRSS57Q6UWY2 283 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 KYAT3Q6YP21 454 aaKnown RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCDC149Q6ZUS6 474 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 MTERF4Q7Z6M4 381 aaKnown RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ARL14EPQ8N8R7 260 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZFPM2Q8WW38 1151 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ASB12Q8WXK4 309 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLMNQ96JQ2 1002 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 STRBPQ96SI9 672 aaKnown RBP2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZBTB26Q9HCK0 441 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 TMOD4Q9NZQ9 345 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 SYNRGQ9UMZ2 1314 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 UNC13AQ9UPW8 1703 aa2.33□□□□□ -2.04
HMGB3P17-201ENST00000504195 SCRIBQ14160 1630 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 hCG_2014768A0A024R1R8 64 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLEC18AA5D8T8 446 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCER2I3L3R5 266 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 MDM4O15151 490 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 SLC16A5O15375 505 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 THAP12O43422 761 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 COQ9O75208 318 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ANXA2P07355 339 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CPA1P15085 419 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ATICP31939 592 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 STAT6P42226 847 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 TNNT2P45379 298 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 GSTM5P46439 218 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAP2K1Q02750 393 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 DMWDQ09019 674 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZRSR1Q15695 479 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ELF2Q15723 593 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 KIAA0753Q2KHM9 967 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 HSP90B2PQ58FF3 399 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM76BQ5HYJ3 339 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 TMEM196Q5HYL7 178 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 TTC39AQ5SRH9 613 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms