RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 GLRA3O75311 464 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 LMNAP02545 664 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 F7P08709 466 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 MLH1P40692 756 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ABL2P42684 1182 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 TKTL1P51854 596 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ALDH18A1P54886 795 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 MAP3K7CLP57077 242 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 SESN3P58005 492 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 CDK18Q07002 472 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 RCN2Q14257 317 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PCLAFQ15004 111 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 RCN1Q15293 331 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PPM1JQ5JR12 505 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ATG14Q6ZNE5 492 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 CTU1Q7Z7A3 348 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 SMC1BQ8NDV3 1235 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 SLC7A14Q8TBB6 771 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ACMSDQ8TDX5 336 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 KCTD13Q8WZ19 329 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 MIEF2Q96C03 454 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ANKRD27Q96NW4 1050 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 CCDC106Q9BWC9 280 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 MMADHCQ9H3L0 296 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 IGSF9Q9P2J2 1179 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 YJEFN3A6XGL0 299 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 B2RBV5 119 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PLIN3O60664 434 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 USP12O75317 370 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 LRPAP1P30533 357 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PSEN2P49810 448 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 KDSRQ06136 332 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 IFRD2Q12894 506 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 UBAP2LQ14157 1087 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 FAM110CQ1W6H9 321 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 STXBP5Q5T5C0 1151 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 TEDDM1Q5T9Z0 273 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 TRIM68Q6AZZ1 485 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 GPRIN1Q7Z2K8 1008 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PID1Q7Z2X4 250 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 RBM15BQ8NDT2 890 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 OR52K1Q8NGK4 314 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 FCRL3Q96P31 734 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 AGAP3Q96P47 875 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PTPN18Q99952 460 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 MED10Q9BTT4 135 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ULBP1Q9BZM6 244 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 DNAI2Q9GZS0 605 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 WDR6Q9NNW5 1121 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 CRTAC1Q9NQ79 661 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 TMEM30AQ9NV96 361 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 FLRT1Q9NZU1 646 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 RPS6KL1Q9Y6S9 549 aa10.12□□□□□ -0.79
CLIP1-204ENST00000501271 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.12□□□□□ -0.79
CLIP1-204ENST00000501271 SCN4AP35499 1836 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 E2F8A0AVK6 867 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PRR5-ARHGAP8B1AHC4 643 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 HAS3O00219 553 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 GABRDO14764 452 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 ERCC2P18074 760 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PTPN3P26045 913 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PGM1P36871 562 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 CACNA2D1P54289 1103 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 ARHGAP8P85298 464 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 BEX3Q00994 111 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 SEMA3BQ13214 749 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 NAB1Q13506 487 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 TUBB3Q13509 450 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
CLIP1-204ENST00000501271 NPWQ8N729 165 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 CERS2Q96G23 380 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 RILPQ96NA2 401 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PPP1R10Q96QC0 940 aaKnown RBP10.11□□□□□ -0.79
CLIP1-204ENST00000501271 FERMT1Q9BQL6 677 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 FAM167BQ9BTA0 163 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 KLHL8Q9P2G9 620 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PLA2G4CQ9UP65 541 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 DNAJC16Q9Y2G8 782 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 EIF4E1BA6NMX2 242 aaKnown RBP10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PSMG1O95456 288 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PROCP04070 461 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 POLBP06746 335 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 SERPINA6P08185 405 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 FAM200BP0CF97 657 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 ARRB2P32121 409 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 ADRA1BP35368 520 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 SLC1A6P48664 564 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 PDE1BQ01064 536 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 DBN1Q16643 649 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 MAVSQ7Z434 540 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 CMC1Q7Z7K0 106 aa10.11□□□□□ -0.79
CLIP1-204ENST00000501271 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms