RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 SPTBN2O15020 2390 aa17.74■□□□□ 0.43
AP004609.1-201ENST00000498872 TBC1D3BA6NDS4 549 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 NEDD8-MDP1E9PL57 170 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 GREM1O60565 184 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 MYBL1P10243 752 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 CHRM1P11229 460 aaPredicted RBP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 KCNA4P22459 653 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 GNA15P30679 374 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 MPLP40238 635 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 CENPCQ03188 943 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 TCEAL6Q6IPX3 200 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 HTR3DQ70Z44 454 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 HDXQ7Z353 690 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 SCD5Q86SK9 330 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 MIB1Q86YT6 1006 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 ETFBKMTQ8IXQ9 262 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 TCEAL3Q969E4 200 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 ERLEC1Q96DZ1 483 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 TMEM176AQ96HP8 235 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 LOXL4Q96JB6 756 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 PNPLA8Q9NP80 782 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 DEC1Q9P2X7 70 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 CNOT8Q9UFF9 292 aaKnown RBP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 TTC7AQ9ULT0 858 aaPredicted RBP17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 ALG6Q9Y672 507 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 NCOR2Q9Y618 2525 aa17.73■□□□□ 0.43
AP004609.1-201ENST00000498872 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 MAP2K7O14733 419 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 SLC30A4O14863 429 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 HOXC11O43248 304 aaPredicted RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 ZNF806P0C7X5 589 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 BCKDHBP21953 392 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 CREB5Q02930 508 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 USP39Q53GS9 565 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 PPP1R2P3Q6NXS1 205 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 CCNI2Q6ZMN8 369 aaPredicted RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 RASSF3Q86WH2 238 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 RLN3Q8WXF3 142 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 BBS2Q9BXC9 721 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 CARD9Q9H257 536 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 STIM2Q9P246 746 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 LSM7Q9UK45 103 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 ADAM23O75077 832 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 HMBSP08397 361 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 TNFRSF8P28908 595 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 WASP42768 502 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 NSFP46459 744 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 RNASE9P60153 205 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 MCOLN2Q8IZK6 566 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 FRMD1Q8N878 549 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 PLK2Q9NYY3 685 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 BCCIPQ9P287 314 aaKnown RBP eCLIP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 DMGDHQ9UI17 866 aaKnown RBP17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 DNMT3LQ9UJW3 386 aa17.72■□□□□ 0.43
AP004609.1-201ENST00000498872 A0A0A0MRY4 1105 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 CCDC188H7C350 402 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 TULP2O00295 520 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 TYRP14679 529 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 TNFRSF4P43489 277 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 PLA2G4AP47712 749 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 CBX1P83916 185 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 PLA2G2CQ5R387 149 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 DCAF12L1Q5VU92 463 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 NAA35Q5VZE5 725 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 PIGZQ86VD9 579 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 ZNF513Q8N8E2 541 aaPredicted RBP17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 TERB1Q8NA31 727 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 HMGB4Q8WW32 186 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 KRT12Q99456 494 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 RASAL2Q9UJF2 1139 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 USP3Q9Y6I4 520 aa17.71■□□□□ 0.43
AP004609.1-201ENST00000498872 TCRBV21S2A2A0A5A6 115 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 THAP12O43422 761 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 RHOBTB1O94844 696 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 COMTP21964 271 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 YWHAEP62258 255 aaKnown RBP17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 NOMO3P69849 1222 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 EFEMP1Q12805 493 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 MESDQ14696 234 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 PPM1JQ5JR12 505 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 EOGTQ5NDL2 527 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 PGBD3Q8N328 593 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 UBL4BQ8N7F7 174 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 NDRG1Q92597 394 aaKnown RBP17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 FAXDC2Q96IV6 333 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 ZSWIM1Q9BR11 485 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 POLMQ9NP87 494 aaPredicted RBP17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 HCN2Q9UL51 889 aa17.7■□□□□ 0.42
AP004609.1-201ENST00000498872 STC2O76061 302 aa17.69■□□□□ 0.42
AP004609.1-201ENST00000498872 ALDH1A2O94788 518 aa17.69■□□□□ 0.42
AP004609.1-201ENST00000498872 RALAP11233 206 aa17.69■□□□□ 0.42
AP004609.1-201ENST00000498872 SLC7A5Q01650 507 aa17.69■□□□□ 0.42
AP004609.1-201ENST00000498872 GOLGA7BQ2TAP0 167 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms