RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF419Q96HQ0 510 aaPredicted RBP8.78□□□□□ -1
HMGXB4-207ENST00000498212 SLC2A13Q96QE2 648 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 PDCL3Q9H2J4 239 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 SYNCQ9H7C4 482 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 FAM204AQ9H8W3 233 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 PLCB1Q9NQ66 1216 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.78□□□□□ -1
HMGXB4-207ENST00000498212 WSB2Q9NYS7 404 aaPredicted RBP8.78□□□□□ -1
HMGXB4-207ENST00000498212 SLC12A6Q9UHW9 1150 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 LAMA1P25391 3075 aa8.78□□□□□ -1
HMGXB4-207ENST00000498212 NUMA1Q14980 2115 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 CACNA1AO00555 2505 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SYNJ2BP-COX16A0A087WUM0 186 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 MEI4A8MW99 385 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 KCNU1A8MYU2 1149 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 F5H5T6 163 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 GOLGA6L22H0YM25 854 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 GRAP2O75791 330 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 LUC7L3O95232 432 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 KCNK5O95279 499 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 MOCS3O95396 460 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 IGLV3-19P01714 112 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ASLP04424 464 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 TPM2P07951 284 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SERPINF2P08697 491 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC2A3P11169 496 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 UCHL3P15374 230 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 CYP11B1P15538 503 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ABCB4P21439 1286 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 OXTRP30559 389 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 CCR1P32246 355 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 MAPK8P45983 427 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ATXN3P54252 364 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ST8SIA6P61647 398 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC6A3Q01959 620 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 GFPT1Q06210 699 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 UAP1L1Q3KQV9 507 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 WDR45BQ5MNZ6 344 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 RBM43Q6ZSC3 357 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC26A9Q7LBE3 791 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ZDHHC17Q8IUH5 632 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 TMEM35BQ8NCS4 154 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF397Q8NF99 534 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 RNF34Q969K3 372 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 TTC17Q96AE7 1141 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 LMLNQ96KR4 655 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 NUP58Q9BVL2 599 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 GPR174Q9BXC1 333 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 FBRSQ9HAH7 460 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 PRSS16Q9NQE7 514 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 DDIT4Q9NX09 232 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 TAB2Q9NYJ8 693 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 COX16Q9P0S2 106 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 KIAA1522Q9P206 1035 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SUSD2Q9UGT4 822 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SUN2Q9UH99 717 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 INTS6Q9UL03 887 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC6A14Q9UN76 642 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 GON4LQ3T8J9 2241 aa8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 ASCC3Q8N3C0 2202 aaKnown RBP8.77□□□□□ -1.01
HMGXB4-207ENST00000498212 F8VZ95 297 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 DAB1O75553 588 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 DNTTP04053 509 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 SRPRAP08240 638 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 SYPP08247 313 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 GNSP15586 552 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 MAOBP27338 520 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 CDH5P33151 784 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 NOS2P35228 1153 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 CSKP41240 450 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 NOVA1P51513 510 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 NME3Q13232 169 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 MTA1Q13330 715 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC12A1Q13621 1099 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 GSE1Q14687 1217 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 PLEKHG6Q3KR16 790 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 FSCBQ5H9T9 825 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 PITRM1Q5JRX3 1037 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 RABGAP1LQ5R372 815 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 N4BP2L1Q5TBK1 243 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 TTC39BQ5VTQ0 682 aaPredicted RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 DCAF12L1Q5VU92 463 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 TAF3Q5VWG9 929 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 SASS6Q6UVJ0 657 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 MMS22LQ6ZRQ5 1243 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM124AQ86V42 546 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 CADM4Q8NFZ8 388 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 MYO19Q96H55 970 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 PRMT1Q99873 361 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 GTPBP2Q9BX10 602 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 NAA15Q9BXJ9 866 aaKnown RBP8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 STK33Q9BYT3 514 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 VPS16Q9H269 839 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 CAPN10Q9HC96 672 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms