RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 NOL6Q9H6R4 1146 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 WFDC1Q9HC57 220 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ADARB2Q9NS39 739 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZDHHC2Q9UIJ5 367 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLC39A10Q9ULF5 831 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 HEBP2Q9Y5Z4 205 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KMT2EQ8IZD2 1858 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 COL6A6A6NMZ7 2263 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GRIN2DO15399 1336 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SMIM9A6NGZ8 99 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 LRRC72A6NJI9 287 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FAM166BA8MTA8 275 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FNDC10F2Z333 226 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 F8W735 103 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 SCAMP1O15126 338 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 EPHB6O15197 1021 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SYNGR3O43761 229 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZEB2O60315 1214 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 JAK2O60674 1132 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SRGAP2O75044 1071 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 STK17BO94768 372 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KIAA0754O94854 1291 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SMC2O95347 1197 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OPN1MWP04001 364 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PRSS1P07477 247 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OPN1MW2P0DN77 364 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OPN1MW3P0DN78 364 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 IL1R1P14778 569 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GNAT2P19087 354 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GPTP24298 496 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CCKBRP32239 447 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ACSL1P33121 698 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ETV3P41162 512 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PTPN9P43378 593 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PREPP48147 710 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GJA8P48165 433 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SRSF3P84103 164 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 BNC1Q01954 994 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KIF23Q02241 960 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 PTPN12Q05209 780 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CALD1Q05682 793 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA8DPQ0D2H9 430 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TRIM25Q14258 630 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GAS6Q14393 721 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 POU4F3Q15319 338 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GRAMD1BQ3KR37 738 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CD300EQ496F6 205 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GTDC1Q4AE62 458 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 NT5DC1Q5TFE4 455 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MZT2BQ6NZ67 158 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 C3orf33Q6P1S2 294 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 UNQ9370/PRO34162Q6UXP9 181 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 BAIAP2L2Q6UXY1 529 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SIGLEC15Q6ZMC9 328 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF627Q7L945 461 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SPRED1Q7Z699 444 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FAM20CQ8IXL6 584 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RNF113BQ8IZP6 322 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 THEM5Q8N1Q8 247 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 C7orf31Q8N865 590 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLC37A3Q8NCC5 494 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 IL17RDQ8NFM7 739 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OR4K13Q8NH42 304 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OR56A3Q8NH54 315 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 VANGL1Q8TAA9 524 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 EPS8L1Q8TE68 723 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TMEM40Q8WWA1 233 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ASB11Q8WXH4 323 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PPWD1Q96BP3 646 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 FEM1CQ96JP0 617 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 WDFY2Q96P53 400 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PHF7Q9BWX1 381 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 C22orf23Q9BZE7 217 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KCNN2Q9H2S1 579 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLCO5A1Q9H2Y9 848 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ANTXR1Q9H6X2 564 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PPANQ9NQ55 473 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 KRT84Q9NSB2 600 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MBNL3Q9NUK0 354 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 VSX1Q9NZR4 365 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 C11orf21Q9P2W6 132 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OPTCQ9UBM4 332 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 NDOR1Q9UHB4 597 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 LNPEPQ9UIQ6 1025 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FBXO9Q9UK97 447 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GRID1Q9ULK0 1009 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 STUB1Q9UNE7 303 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 USTQ9Y2C2 406 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MAD1L1Q9Y6D9 718 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CEP295Q9C0D2 2601 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SETD2Q9BYW2 2564 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 IGKV1-8A0A0C4DH67 115 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CCDC162PA2VCL2 907 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 EIF3CLB5ME19 914 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 CYR61O00622 381 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CFLARO15519 480 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 FFAR2O15552 330 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SUPT7LO94864 414 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 TTC4O95801 387 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RBMY1CP0DJD4 496 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms