RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 FERMT1Q9BQL6 677 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 MPP6Q9NZW5 540 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 VANGL2Q9ULK5 521 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 LCHNA4D1U4 455 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 ELF1P32519 619 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 GARSP41250 739 aaKnown RBP18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 PPIDQ08752 370 aaKnown RBP18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 TAF12Q16514 161 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 BBS9Q3SYG4 887 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 MS4A13Q5J8X5 152 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 PDIK1LQ8N165 341 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 FAM76AQ8TAV0 307 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 HDAC11Q96DB2 347 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 NACA2Q9H009 215 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 CATSPERBQ9H7T0 1116 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 ZMYND8Q9ULU4 1186 aaPredicted RBP18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 HMGB1P1B2RPK0 211 aaPredicted RBP18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 DFFAO00273 331 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 NCAM2O15394 837 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 IGLV3-27P01718 113 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 SPATA31D3P0C874 917 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 MX2P20592 715 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 HTR7P34969 479 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 WASHC5Q12768 1159 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 LONRF1Q17RB8 773 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 C4orf22Q6V702 233 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 SPATA31D4Q6ZUB0 917 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 HERC6Q8IVU3 1022 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 ATP6V0D2Q8N8Y2 350 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 WDR83Q9BRX9 315 aaKnown RBP18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 NDFIP2Q9NV92 336 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 ADAM21Q9UKJ8 722 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 INSL5Q9Y5Q6 135 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 NUP205Q92621 2012 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 ZNF840PA6NDX5 716 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 E7EVH7 732 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 IRAK1P51617 712 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 MLLT6P55198 1093 aaPredicted RBP18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 ZNF567Q8N184 647 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 CLP1Q92989 425 aaKnown RBP18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 BTN2A3PQ96KV6 586 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 TTC25Q96NG3 672 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 SERPINB12Q96P63 405 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 VPS37BQ9H9H4 285 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 SLC12A6Q9UHW9 1150 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
CHRNA4-206ENST00000498043 NYNRINQ9P2P1 1898 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 ALOX15BO15296 676 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 TLL1O43897 1013 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 OPHN1O60890 802 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 AVILO75366 819 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 CNPP09543 421 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 CTSAP10619 480 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 NRG1Q02297 640 aaPredicted RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 AUHQ13825 339 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 RAP1GAP2Q684P5 730 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 FBXO36Q8NEA4 188 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 OVCA2Q8WZ82 227 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 EXOC4Q96A65 974 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 C1orf74Q96LT6 269 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 PHACTR1Q9C0D0 580 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 TMEM51Q9NW97 253 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 FNIP2Q9P278 1114 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 KLHL8Q9P2G9 620 aaPredicted RBP18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 DNMT3LQ9UJW3 386 aa18.28■□□□□ 0.52
CHRNA4-206ENST00000498043 E7ESA3 106 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 RASGRF2O14827 1237 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 LILRB3O75022 631 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 PTPN3P26045 913 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 PSMB4P28070 264 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 MAGEA6P43360 314 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 KCNQ1P51787 676 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 PPP1R21Q6ZMI0 780 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 ARHGAP36Q6ZRI8 547 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 TFAP2DQ7Z6R9 452 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 ARHGAP12Q8IWW6 846 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 TCEAL8Q8IYN2 117 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 RTL3Q8N8U3 475 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 PYROXD1Q8WU10 500 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 MYRFLQ96LU7 910 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 CDK5RAP1Q96SZ6 601 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 TRPM5Q9NZQ8 1165 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 CHMP2BQ9UQN3 213 aa18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 MYO18AQ92614 2054 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-206ENST00000498043 COCHO43405 550 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 HPDP32754 393 aaPredicted RBP18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 CREMQ03060 361 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 RING1Q06587 406 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 ZBTB17Q13105 803 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 SEMA5AQ13591 1074 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 HECTD3Q5T447 861 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 TMC7Q7Z402 723 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 TADA2BQ86TJ2 420 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF683Q8IZ20 524 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms