RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 PEX14O75381 377 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 BANF1O75531 89 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 ASMTLO95671 621 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 LCP1P13796 627 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 YWHAZP63104 245 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM189BP81408 668 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 ADIGQ0VDE8 80 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 NR1H3Q13133 447 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 EIF2B5Q13144 721 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC1A5Q15758 541 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 CA9Q16790 459 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 RFWD3Q6PCD5 774 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 PPP1R21Q6ZMI0 780 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 DENND2DQ9H6A0 471 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 ALG13Q9NP73 1137 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 PAK5Q9P286 719 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 AP4E1Q9UPM8 1137 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 HACD1B0YJ81 288 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 EOMESO95936 686 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 COL6A1P12109 1028 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TFE3P19532 575 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 BDNFP23560 247 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 GCAP28676 217 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 ZNF135P52742 658 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 ARL4CP56559 192 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 OVGP1Q12889 678 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 LBRQ14739 615 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 CDO1Q16878 200 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TAF1BQ53T94 588 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 LPPQ93052 612 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SMARCD1Q96GM5 515 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 ANKRD27Q96NW4 1050 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 OLFM3Q96PB7 478 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 QKIQ96PU8 341 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 KCTD15Q96SI1 283 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SMOQ99835 787 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 LRMDAQ9H2I8 198 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TRABDQ9H4I3 376 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 PIDD1Q9HB75 910 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SAE1Q9UBE0 346 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 DCTN4Q9UJW0 460 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 STAP1Q9ULZ2 295 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TIMM22Q9Y584 194 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SH3BP5O60239 455 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 MTRF1O75570 445 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 ELNP15502 786 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 CA4P22748 312 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 CYP2F1P24903 491 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 PTDSS1P48651 473 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 ERFP50548 548 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC18A1P54219 525 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 PRMT2P55345 433 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 BCAR1P56945 870 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 DAOAP59103 153 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 HIF1AQ16665 826 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 TIGD5Q53EQ6 642 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 DSTYKQ6XUX3 929 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 DEFB106AQ8N104 65 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SUSD3Q96L08 255 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 NPHS2Q9NP85 383 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 RAD54BQ9Y620 910 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 USH1CQ9Y6N9 552 aa11.9□□□□□ -0.5
SNRNP200-208ENST00000497539 GOLGA8MH3BSY2 632 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 KDM1AO60341 852 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 AOC2O75106 756 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 GCATO75600 419 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 BEST1O76090 585 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 HCAR3P49019 387 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 AFF1P51825 1210 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 FAM182AQ5T1J6 154 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 MTDHQ86UE4 582 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 TRABD2AQ86V40 505 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 ZMIZ2Q8NF64 920 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 PCED1BQ96HM7 432 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 DHRS4Q9BTZ2 278 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 ZMAT5Q9UDW3 170 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms