RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 POPDC2Q9HBU9 364 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 TJP2Q9UDY2 1190 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 CEP83Q9Y592 693 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 PKD1L2Q7Z442 2459 aa13.42□□□□□ -0.26
FN1-226ENST00000496542 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 HYAL3O43820 417 aaPredicted RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 SH3BP5O60239 455 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 GJB3O75712 270 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 SEMA4FO95754 770 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 PROS1P07225 676 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 TACR2P21452 398 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 YWHAZP63104 245 aaKnown RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 TAF5Q15542 800 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 EXOC3L4Q17RC7 722 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 PITRM1Q5JRX3 1037 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 BEND5Q7L4P6 421 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 TMEM110Q86TL2 294 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 GANCQ8TET4 914 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 TTC17Q96AE7 1141 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 PCED1AQ9H1Q7 454 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 THAP9Q9H5L6 903 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 COX16Q9P0S2 106 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 APEX2Q9UBZ4 518 aa13.41□□□□□ -0.26
FN1-226ENST00000496542 INTS6Q9UL03 887 aaKnown RBP13.41□□□□□ -0.26
FN1-226ENST00000496542 NYNRINQ9P2P1 1898 aaKnown RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 A0A1B0GVT2 93 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 H0Y626 953 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 SIN3BO75182 1162 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 FSBPO95073 299 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 ASLP04424 464 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 ZBTB16Q05516 673 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 FSCBQ5H9T9 825 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 CIR1Q86X95 450 aaPredicted RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 NAXDQ8IW45 347 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 DHX40Q8IX18 779 aaKnown RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 SHC3Q92529 594 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 MYO19Q96H55 970 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 BTN2A3PQ96KV6 586 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 CPXM1Q96SM3 734 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 BTBD1Q9H0C5 482 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 GAREM1Q9H706 876 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 IL21RQ9HBE5 538 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 AJAP1Q9UKB5 411 aaPredicted RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 PCDHB9Q9Y5E1 797 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 SLCO1B1Q9Y6L6 691 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 ASPMQ8IZT6 3477 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 GOLGA4Q13439 2230 aaKnown RBP13.4□□□□□ -0.26
FN1-226ENST00000496542 ZZEF1O43149 2961 aa13.4□□□□□ -0.26
FN1-226ENST00000496542 GTPBP10A4D1E9 387 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 F5H5T6 163 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 GRAP2O75791 330 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 MOCS3O95396 460 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 CER1O95813 267 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 IGLV3-25P01717 112 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 PON1P27169 355 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 MATKP42679 507 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 NUMBP49757 651 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 CDK17Q00537 523 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 BNC1Q01954 994 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 HNRNPDQ14103 355 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 RNF219Q5W0B1 726 aaPredicted RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 IL27RAQ6UWB1 636 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 DEFB106AQ8N104 65 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 ATP6V0D2Q8N8Y2 350 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 C1orf131Q8NDD1 294 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 C1orf216Q8TAB5 229 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 RNF34Q969K3 372 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 MRGPRX3Q96LB0 322 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 DDIT4Q9NX09 232 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 SLC12A6Q9UHW9 1150 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 KLK13Q9UKR3 277 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 ERVW-1Q9UQF0 538 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 FNDC3AQ9Y2H6 1198 aaKnown RBP13.39□□□□□ -0.27
FN1-226ENST00000496542 TMEM131Q92545 1883 aa13.39□□□□□ -0.27
FN1-226ENST00000496542 TP53BP1Q12888 1972 aaPredicted RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 ACACAQ13085 2346 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 FAM47DPA6NHR8 397 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 KCNU1A8MYU2 1149 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 HSF2BPO75031 334 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 C7P10643 843 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms