RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 PRDM16Q9HAZ2 1276 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
COMMD3-214ENST00000496071 DLL3Q9NYJ7 618 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 SUN2Q9UH99 717 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 MBD1Q9UIS9 605 aaPredicted RBP17.63■□□□□ 0.41
COMMD3-214ENST00000496071 CKAP5Q14008 2032 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 NUP205Q92621 2012 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
COMMD3-214ENST00000496071 CEP192Q8TEP8 1941 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 SDK1Q7Z5N4 2213 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 MMP8P22894 467 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 PRKCHP24723 683 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 CXCR3P49682 368 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 SULT1E1P49888 294 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 OXCT1P55809 520 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 ST8SIA6P61647 398 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 DEUP1Q05D60 604 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 KIAA1324Q6UXG2 1013 aaKnown RBP17.62■□□□□ 0.41
COMMD3-214ENST00000496071 CYP2U1Q7Z449 544 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 FRMD1Q8N878 549 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 NETO1Q8TDF5 533 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 CYB5D2Q8WUJ1 264 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 PRCCQ92733 491 aaPredicted RBP17.62■□□□□ 0.41
COMMD3-214ENST00000496071 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 TMEM245Q9H330 911 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 FBRSQ9HAH7 460 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 TMEM59LQ9UK28 342 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 CDV3Q9UKY7 258 aaKnown RBP17.62■□□□□ 0.41
COMMD3-214ENST00000496071 MYO6Q9UM54 1294 aa17.62■□□□□ 0.41
COMMD3-214ENST00000496071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 IGHV1OR15-9A0A0B4J2B8 117 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 A0A1B0GVM2 712 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 TCAF2A6NFQ2 919 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 GOLGA8SH3BPF8 625 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 UNGP13051 313 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 FERP16591 822 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 TPM4P67936 248 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 RPL6Q02878 288 aaKnown RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 CAMK2GQ13555 558 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 IQCB1Q15051 598 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 PTPRNQ16849 979 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 AASDHQ4L235 1098 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 C2CD6Q53TS8 623 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 ERMP1Q7Z2K6 904 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 TMPRSS6Q8IU80 811 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 TMEFF1Q8IYR6 380 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 CCAR2Q8N163 923 aaKnown RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 KDM1BQ8NB78 822 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 ERLEC1Q96DZ1 483 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 SIPA1Q96FS4 1042 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 MKRN2Q9H000 416 aaKnown RBP17.61■□□□□ 0.41
COMMD3-214ENST00000496071 ITM2CQ9NQX7 267 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 PIGVQ9NUD9 493 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 ARHGEF38Q9NXL2 777 aa17.61■□□□□ 0.41
COMMD3-214ENST00000496071 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 SYCE3A1L190 88 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 TEX33O43247 280 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 NDUFS2O75306 463 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 PAGE1O75459 146 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 SRPRAP08240 638 aaKnown RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 ACADMP11310 421 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 OXTRP30559 389 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 FLT3P36888 993 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 CSKP41240 450 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 NSFP46459 744 aaKnown RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 COPAP53621 1224 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 SF3A2Q15428 464 aaKnown RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 CCDC6Q16204 474 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 FSCBQ5H9T9 825 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 PITRM1Q5JRX3 1037 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 OTUD1Q5VV17 481 aaPredicted RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 FBXL22Q6P050 247 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 OR2T3Q8NH03 318 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 TBCBQ99426 244 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 AGPAT1Q99943 283 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 RTKNQ9BST9 563 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 TKTL2Q9H0I9 626 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 SLC6A17Q9H1V8 727 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 INTS6Q9UL03 887 aaKnown RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 CYP8B1Q9UNU6 501 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 HS3ST4Q9Y661 456 aa17.6■□□□□ 0.41
COMMD3-214ENST00000496071 MUC22E2RYF6 1773 aaPredicted RBP17.6■□□□□ 0.41
COMMD3-214ENST00000496071 TNRC6BQ9UPQ9 1833 aaKnown RBP17.59■□□□□ 0.41
COMMD3-214ENST00000496071 A0A1W2PQC6 194 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 CALB1P05937 261 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 HLA-EP13747 358 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 PLK1P53350 603 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 LIMK1P53667 647 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 CENPCQ03188 943 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 CLEC16AQ2KHT3 1053 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
COMMD3-214ENST00000496071 PLEKHG6Q3KR16 790 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 C5orf22Q49AR2 442 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 LYSMD4Q5XG99 296 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 SYT12Q8IV01 421 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 SLC30A5Q8TAD4 765 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 PIGKQ92643 395 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms