RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 SYDE1Q6ZW31 735 aaPredicted RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 UTS2BQ765I0 119 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 PDZD4Q76G19 769 aaPredicted RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 NECAB2Q7Z6G3 386 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 USP37Q86T82 979 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 MMAAQ8IVH4 418 aaKnown RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 GPR161Q8N6U8 529 aaKnown RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 FBXO22Q8NEZ5 403 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 CDC6Q99741 560 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 SH3GL2Q99962 352 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 MRPL37Q9BZE1 423 aaKnown RBP9.59□□□□□ -0.87
RPSA-209ENST00000495394 EHD4Q9H223 541 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 MAD2L2Q9UI95 211 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 PCDHA5Q9Y5H7 936 aa9.59□□□□□ -0.87
RPSA-209ENST00000495394 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 H3BM21 787 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 NDUFS6O75380 124 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 PSIP1O75475 530 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 SOAT2O75908 522 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ITGB8P26012 769 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 NMT1P30419 496 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 RFC1P35251 1148 aaPredicted RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 HOXD13P35453 343 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 PRCPP42785 496 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ARCN1P48444 511 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 SLC7A2P52569 658 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 CUL4AQ13619 759 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 PLA2G4EQ3MJ16 856 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 FIGNQ5HY92 759 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 TMEM67Q5HYA8 995 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 GTF2IRD2BQ6EKJ0 949 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 OR52E8Q6IFG1 317 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ANO7Q6IWH7 933 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 SCYL2Q6P3W7 929 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 PIWIL3Q7Z3Z3 882 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 GTF2IRD2Q86UP8 949 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 MICU3Q86XE3 530 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ZSWIM9Q86XI8 627 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 MAPKAPK5Q8IW41 473 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 CLEC4FQ8N1N0 589 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 KLHL36Q8N4N3 616 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 DNAJC5GQ8N7S2 189 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 C11orf65Q8NCR3 313 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 Q8NFD4 153 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 HEXDCQ8WVB3 486 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 NELFBQ8WX92 580 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ATP2A3Q93084 1043 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 SEC16BQ96JE7 1060 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 RANBP9Q96S59 729 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 CSRNP1Q96S65 589 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 RBM4BQ9BQ04 359 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 RBM4Q9BWF3 364 aaKnown RBP9.58□□□□□ -0.88
RPSA-209ENST00000495394 KCNH6Q9H252 994 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 DPEP3Q9H4B8 488 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 TIMMDC1Q9NPL8 285 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 HAUS2Q9NVX0 235 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 PALD1Q9ULE6 856 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 SLC22A14Q9Y267 594 aa9.58□□□□□ -0.88
RPSA-209ENST00000495394 TRBV23OR9-2A0A075B6M9 112 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 PPEF2O14830 753 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 ZBTB24O43167 697 aaPredicted RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 CNOT3O75175 753 aaKnown RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 LGR5O75473 907 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 UFL1O94874 794 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 PRPF6O94906 941 aaKnown RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 NPR1P16066 1061 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 PDHA2P29803 388 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 PCGF2P35227 344 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 NUDT1P36639 197 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 IL15P40933 162 aaPredicted RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 GBX2P52951 348 aaPredicted RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 PPIL2Q13356 520 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 AUHQ13825 339 aaKnown RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 DHCR24Q15392 516 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 LSM12Q3MHD2 195 aaKnown RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 KCTD21Q4G0X4 260 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 SGO1Q5FBB7 561 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 CCNJQ5T5M9 372 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 COL13A1Q5TAT6 717 aaPredicted RBP9.57□□□□□ -0.88
RPSA-209ENST00000495394 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
RPSA-209ENST00000495394 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms