RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PSMC3	P17980	439 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	MX2	P20592	715 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	NR2C2	P49116	596 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	CDH4	P55283	916 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	FCHO2	Q0JRZ9	810 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	NR1H3	Q13133	447 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	ZNF211	Q13398	564 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	DPYS	Q14117	519 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	LONRF2	Q1L5Z9	754 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	C6orf118	Q5T5N4	469 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	SLC9A4	Q6AI14	798 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	NADSYN1	Q6IA69	706 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	FBXL22	Q6P050	247 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	BBS7	Q8IWZ6	715 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	RTL3	Q8N8U3	475 aa	Known RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	TTC16	Q8NEE8	873 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	TMA16	Q96EY4	203 aa	Known RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	RUNDC3B	Q96NL0	473 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	FERMT1	Q9BQL6	677 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	ARHGEF4	Q9NR80	690 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	TMEM248	Q9NWD8	314 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	MARK1	Q9P0L2	795 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	IGSF9	Q9P2J2	1179 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	XPO7	Q9UIA9	1087 aa	Known RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	CDH23	Q9H251	3354 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ANHX	E9PGG2	379 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	APOC4-APOC2	K7ER74	178 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	APOC2	P02655	101 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ERCC2	P18074	760 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	FCAR	P24071	287 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	CXCR5	P32302	372 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ZXDB	P98169	803 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	PREPL	Q4J6C6	727 aa	Predicted RBP	13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF783	Q6ZMS7	281 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	SETD3	Q86TU7	594 aa	Predicted RBP	13.95	□□□□□ -0.18
APTX-231	ENST00000494973	LRRC49	Q8IUZ0	686 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF683	Q8IZ20	524 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	PYROXD2	Q8N2H3	581 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	CPA6	Q8N4T0	437 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	P3H4	Q92791	437 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	EXOC4	Q96A65	974 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	HAUS1	Q96CS2	278 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	BRD8	Q9H0E9	1235 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	TMPRSS4	Q9NRS4	437 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	THEG	Q9P2T0	379 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	PRKAG3	Q9UGI9	489 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	CDH22	Q9UJ99	828 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	MRFAP1	Q9Y605	127 aa		13.95	□□□□□ -0.18
APTX-231	ENST00000494973	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.95	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CCDC188	H7C350	402 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	GFRA2	O00451	464 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	PPP1R12A	O14974	1030 aa	Predicted RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	DCLK1	O15075	740 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	FANCG	O15287	622 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CHAD	O15335	359 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CST8	O60676	142 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CD48	P09326	243 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	IL4R	P24394	825 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	SLC6A4	P31645	630 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	VIPR2	P41587	438 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	NDST2	P52849	883 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	YBEY	P58557	167 aa	Predicted RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	GAD2	Q05329	585 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF177	Q13360	481 aa	Predicted RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CDH18	Q13634	790 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	HTR4	Q13639	388 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	PAFAH1B3	Q15102	231 aa	Known RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	KAZN	Q674X7	775 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	CEP112	Q8N8E3	955 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	PCDH19	Q8TAB3	1148 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	DDI1	Q8WTU0	396 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	COG1	Q8WTW3	980 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	IRF7	Q92985	503 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	TRMT61B	Q9BVS5	477 aa	Known RBP	13.94	□□□□□ -0.18
APTX-231	ENST00000494973	SLC2A11	Q9BYW1	496 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	SPHK2	Q9NRA0	654 aa		13.94	□□□□□ -0.18
APTX-231	ENST00000494973	FAM72C	H0Y354	149 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	MCF2L	O15068	1137 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	HOXC11	O43248	304 aa	Predicted RBP	13.93	□□□□□ -0.18
APTX-231	ENST00000494973	LUC7L3	O95232	432 aa	Known RBP	13.93	□□□□□ -0.18
APTX-231	ENST00000494973	OR1E1	P30953	314 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	GGCX	P38435	758 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	LMNB2	Q03252	620 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF33A	Q06730	810 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	KLF1	Q13351	362 aa	Predicted RBP	13.93	□□□□□ -0.18
APTX-231	ENST00000494973	XRCC4	Q13426	336 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	SLC12A1	Q13621	1099 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	PDK1	Q15118	436 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	PARP15	Q460N3	678 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	FAM72A	Q5TYM5	149 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	NCBP2-AS2	Q69YL0	99 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	TANGO2	Q6ICL3	276 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	FAM72D	Q6L9T8	149 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	RFWD3	Q6PCD5	774 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	VIT	Q6UXI7	678 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	NLRP14	Q86W24	1093 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	FAM72B	Q86X60	149 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	CREG2	Q8IUH2	290 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms