RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZNF670Q9BS34 389 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 PIH1D1Q9NWS0 290 aaKnown RBP15.75■□□□□ 0.11
SDF4-207ENST00000494748 MFHAS1Q9Y4C4 1052 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
SDF4-207ENST00000494748 E2F8A0AVK6 867 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 CCDC130P13994 396 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 RARS2Q5T160 578 aaKnown RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 METTL21CQ5VZV1 264 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 AMIGO2Q86SJ2 522 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 MRPL1Q9BYD6 325 aaKnown RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 ACOT8O14734 319 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 ONECUT3O60422 494 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 ZNF26P17031 533 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 SERPINB5P36952 375 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 NUDT2P50583 147 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 FSCBQ5H9T9 825 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 CMC1Q7Z7K0 106 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 CDKL3Q8IVW4 592 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 PGLYRP2Q96PD5 576 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 GCOM2Q9BZD3 368 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 Q9H521 79 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 MAGEB3O15480 346 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 TRMUO75648 421 aaKnown RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 GABBR2O75899 941 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 FAM58BPP0C7Q3 252 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 CPA3P15088 417 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 CYP2F1P24903 491 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 GALK1P51570 392 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 OLFML1Q6UWY5 402 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 SNX32Q86XE0 403 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 PGBD4Q96DM1 585 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 MOCOSQ96EN8 888 aa15.74■□□□□ 0.11
SDF4-207ENST00000494748 HEMK1Q9Y5R4 338 aaPredicted RBP15.74■□□□□ 0.11
SDF4-207ENST00000494748 ZNF487B1APH4 448 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 AIM2O14862 343 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 MDM4O15151 490 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 SURF1Q15526 300 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 SMAD1Q15797 465 aaKnown RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 BOLA3Q53S33 107 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 PPP6R3Q5H9R7 873 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZFP1Q6P2D0 407 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 CLEC14AQ86T13 490 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 MAP7D3Q8IWC1 876 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZBED3Q96IU2 234 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZNF512Q96ME7 567 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 CDRT15Q96T59 188 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 SNX15Q9NRS6 342 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 GTF2IRD1Q9UHL9 959 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 MAFO75444 373 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 NFICP08651 508 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 MLNP12872 115 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 EPHA3P29320 983 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 CHRNA5P30532 468 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 NR1H2P55055 460 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 PDK1Q15118 436 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 KCNT2Q6UVM3 1135 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 GJD4Q96KN9 370 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 MORF4L1Q9UBU8 362 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 HESX1Q9UBX0 185 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZSWIM8A7E2V4 1837 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 C7orf72A4D263 438 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 F5H423 210 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 AMHP03971 560 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 F7P08709 466 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 MGAT1P26572 445 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ALDH3B2P48448 385 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ADARP55265 1226 aaKnown RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 FLOT2Q14254 428 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 ZNF667Q5HYK9 610 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 LRRC8BQ6P9F7 803 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 BHLHE22Q8NFJ8 381 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 TMIGD2Q96BF3 282 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 LRGUKQ96M69 825 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 WDR55Q9H6Y2 383 aaPredicted RBP15.73■□□□□ 0.11
SDF4-207ENST00000494748 CDY2AQ9Y6F7 541 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
SDF4-207ENST00000494748 RAD17O75943 681 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 PTPN1P18031 435 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 OSTNP61366 133 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 NAB1Q13506 487 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 SCYL2Q6P3W7 929 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 CPSF7Q8N684 471 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 TCF7L2Q9NQB0 619 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 RGSL1A5PLK6 1076 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 STX16-NPEPL1H3BU86 382 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 PFDN1O60925 122 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 RNASEH2AO75792 299 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 BCAS2O75934 225 aaPredicted RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 TNNC2P02585 160 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 LTFP02788 710 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 PRKCBP05771 671 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 PKNOX1P55347 436 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms