RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 RNPEPL1Q9HAU8 725 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 KCNK4Q9NYG8 393 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 I6L893 689 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DCLK1O15075 740 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 F7P08709 466 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 GNAT1P11488 350 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CALB2P22676 271 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 GMPRP36959 345 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DAOAP59103 153 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TPI1P60174 286 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 RPL10AP62906 217 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 NIPAL4Q0D2K0 466 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PDE1CQ14123 709 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 FSCN1Q16658 493 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TEX44Q53QW1 395 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PPM1JQ5JR12 505 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 RASSF3Q86WH2 238 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 KIRREL3Q8IZU9 778 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 EIF2B3Q9NR50 452 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TAS2R1Q9NYW7 299 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 ZFATQ9P243 1243 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TXNDC16Q9P2K2 825 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 ST3GAL5Q9UNP4 418 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 POLBP06746 335 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 CTSHP09668 335 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 KRT72Q14CN4 511 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 CCNJLQ8IV13 435 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 MCUR1Q96AQ8 359 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 LBHD1Q9BQE6 289 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 RHOBTB2Q9BYZ6 727 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 PRDM16Q9HAZ2 1276 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 WDR6Q9NNW5 1121 aaKnown RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 TMEM30AQ9NV96 361 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 CASTOR2A6NHX0 329 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 BIRC5O15392 142 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 LYPLA1O75608 230 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ENO1P06733 434 aaKnown RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 THP07101 528 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ITGA2BP08514 1039 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 PTPN3P26045 913 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 KYAT3Q6YP21 454 aaKnown RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 C4orf50Q6ZRC1 276 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 PDZD4Q76G19 769 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 DNAAF3Q8N9W5 541 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ZMIZ2Q8NF64 920 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 ATXN7L3BQ96GX2 97 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 FCRL3Q96P31 734 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-209ENST00000494623 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 KATNAL1Q9BW62 490 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 FAM105AQ9NUU6 356 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 IGSF9Q9P2J2 1179 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 FBXW11Q9UKB1 542 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 EMCNQ9ULC0 261 aa11.5□□□□□ -0.57
CHMP3-209ENST00000494623 B2RBV5 119 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 M0QZ92 97 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 ITM2AO43736 263 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 SNNO75324 88 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 FBXO21O94952 628 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 GSRP00390 522 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 C6orf222P0C671 652 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 TPBGLP0DKB5 382 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 TYK2P29597 1187 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 LHX1P48742 406 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 CLNS1AP54105 237 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 PURAQ00577 322 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 RCN2Q14257 317 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 GPR162Q16538 588 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 KHDC1Q4VXA5 237 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 TREML1Q86YW5 311 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 C3orf58Q8NDZ4 430 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 APOL2Q9BQE5 337 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 WWP1Q9H0M0 922 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 WDCPQ9H6R7 721 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 THAP1Q9NVV9 213 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 GNAZP19086 355 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 FKBP1BP68106 108 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 NPWQ8N729 165 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 ZNF669Q96BR6 464 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 CERS2Q96G23 380 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 ZNF570Q96NI8 536 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 SLC9A7Q96T83 725 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms