RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 MARK4Q96L34 752 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 MFSD14AQ96MC6 490 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 AMNQ9BXJ7 453 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 HOMER2Q9NSB8 354 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 C1orf112Q9NSG2 853 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 GID8Q9NWU2 228 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 SFMBT1Q9UHJ3 866 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 ST14Q9Y5Y6 855 aa10.39□□□□□ -0.75
LINC00488-201ENST00000494582 FAM159BA6NKW6 160 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FAM155AB1AL88 458 aaPredicted RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 NEMP1O14524 444 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SPAG6O75602 509 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SEC24DO94855 1032 aaPredicted RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 KCNH1O95259 989 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ME2P23368 584 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 IDUAP35475 653 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ESRRGP62508 458 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 LSM12Q3MHD2 195 aaKnown RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FAM209AQ5JX71 171 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 B3GNT9Q6UX72 402 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TMC2Q8TDI7 906 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ADAMTS16Q8TE57 1224 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TFAP2CQ92754 450 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ALPK1Q96QP1 1244 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SERPINI1Q99574 410 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 CTRCQ99895 268 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FRMD8Q9BZ67 464 aaPredicted RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 NOL11Q9H8H0 719 aaKnown RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 WDR41Q9HAD4 459 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TMEM216Q9P0N5 145 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TJP2Q9UDY2 1190 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 VPS28Q9UK41 221 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FZD1Q9UP38 647 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 PCDHB4Q9Y5E5 795 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 CPQQ9Y646 472 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ZNF335Q9H4Z2 1342 aaPredicted RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 A0A087WXM4 84 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 C1orf232A0A0U1RR37 186 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TPP1O14773 563 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 PFDN6O15212 129 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 AKAP10O43572 662 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 KDM1AO60341 852 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 JAK1P23458 1154 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 KDELR1P24390 212 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 CCR10P46092 362 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 IFITM2Q01629 132 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 NFATC3Q12968 1075 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 DPYSQ14117 519 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 INAQ16352 499 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SLFN13Q68D06 897 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 C16orf89Q6UX73 402 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 KRT27Q7Z3Y8 459 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FBXO11Q86XK2 927 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SIAH1Q8IUQ4 282 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TRUB1Q8WWH5 349 aaKnown RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 NPAS2Q99743 824 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 FERMT1Q9BQL6 677 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TRPV6Q9H1D0 765 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 NANOGQ9H9S0 305 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SMOXQ9NWM0 555 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 UTP6Q9NYH9 597 aaKnown RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 TMA7Q9Y2S6 64 aaKnown RBP10.38□□□□□ -0.75
LINC00488-201ENST00000494582 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 AP4S1Q9Y587 144 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
LINC00488-201ENST00000494582 ANKRD34BA5PLL1 514 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 TRIM64A6NGJ6 449 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 C9IYK1 514 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 H0YJX3 145 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 NRP1O14786 923 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 LRCH4O75427 683 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 JRKO75564 520 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 VNN1O95497 513 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 HLA-DRAP01903 254 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 F7P08709 466 aaPredicted RBP10.37□□□□□ -0.75
LINC00488-201ENST00000494582 MATN1P21941 496 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 POLR2IP36954 125 aaKnown RBP10.37□□□□□ -0.75
LINC00488-201ENST00000494582 GRIA1P42261 906 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 NEK2P51955 445 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 SOX10P56693 466 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 IFITM3Q01628 133 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 SELENBP1Q13228 472 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 TAZQ16635 292 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 ARL13BQ3SXY8 428 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 BRDTQ58F21 947 aaPredicted RBP10.37□□□□□ -0.75
LINC00488-201ENST00000494582 FSCBQ5H9T9 825 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 SLC10A5Q5PT55 438 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 PERM1Q5SV97 790 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 LGSNQ5TDP6 509 aa10.37□□□□□ -0.75
LINC00488-201ENST00000494582 DNAJC24Q6P3W2 148 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms