RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 IKBKBO14920 756 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 VNN1O95497 513 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 NR2F2P24468 414 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 ANXA13P27216 316 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 VAMP7P51809 220 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 ZNF143P52747 638 aaPredicted RBP8.58□□□□□ -1.04
RIF1-211ENST00000494333 NUCB2P80303 420 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 MTAPQ13126 283 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 KCNB1Q14721 858 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 PPP2R5DQ14738 602 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 SGSM1Q2NKQ1 1148 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 ZNF667Q5HYK9 610 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 MDH1BQ5I0G3 518 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 RALGPS1Q5JS13 557 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 CBLL1Q75N03 491 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 GUF1Q8N442 669 aaKnown RBP8.58□□□□□ -1.04
RIF1-211ENST00000494333 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 TRMT2BQ96GJ1 504 aaKnown RBP8.58□□□□□ -1.04
RIF1-211ENST00000494333 SPATA17Q96L03 361 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 DPEP3Q9H4B8 488 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 TRPC7Q9HCX4 862 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 TDP1Q9NUW8 608 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 CCL26Q9Y258 94 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 COL4A3Q01955 1670 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 F8VP50 259 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 CLDN5O00501 218 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SUSD5O60279 629 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 TADA3O75528 432 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 AKAP3O75969 853 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 CKMP06732 381 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 CHRNB1P11230 501 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 NAT2P11245 290 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 VAV1P15498 845 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 HDCP19113 662 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 RPL13P26373 211 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 RPL10P27635 214 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 RAP1GAPP47736 663 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ADAM9Q13443 819 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 PNOCQ13519 176 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 RUNX3Q13761 415 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ITPRIPL2Q3MIP1 535 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ZACNQ401N2 412 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 TRIM68Q6AZZ1 485 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 CC2D1AQ6P1N0 951 aaPredicted RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 C1orf228Q6PIY5 440 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ZC3H14Q6PJT7 736 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 DENND5BQ6ZUT9 1274 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 RALGPS2Q86X27 583 aaPredicted RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 ADSSL1Q8N142 457 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ARL14EPQ8N8R7 260 aaPredicted RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 B3GALNT2Q8NCR0 500 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 EEF2KMTQ96G04 330 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 MSANTD3Q96H12 275 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 RCC1LQ96I51 464 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 C8orf48Q96LL4 319 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 CEP295NLQ96MC4 621 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SLC22A12Q96S37 553 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 B3GNT5Q9BYG0 378 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SEMA4AQ9H3S1 761 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 EBF3Q9H4W6 596 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SMYD3Q9H7B4 428 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 KIF9Q9HAQ2 790 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 RBM12Q9NTZ6 932 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 FBXO4Q9UKT5 387 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 SF3B6Q9Y3B4 125 aaKnown RBP8.57□□□□□ -1.04
RIF1-211ENST00000494333 CACNA1HO95180 2353 aa8.57□□□□□ -1.04
RIF1-211ENST00000494333 TRAV19A0A0A6YYK7 116 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 TMEM82A0PJX8 343 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 C2orf78A6NCI8 922 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 OTOL1A6NHN0 477 aaPredicted RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 MAPK13O15264 365 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ZNF205O95201 554 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 LMNAP02545 664 aaKnown RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 KRT13P13646 458 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 P4HA1P13674 534 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 PSMC2P35998 433 aaKnown RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 GCLMP48507 274 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 CACNA2D1P54289 1103 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 IFRD2Q12894 506 aaPredicted RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 ZNF268Q14587 947 aaPredicted RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 PON2Q15165 354 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 NFIL3Q16649 462 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ZNF528Q3MIS6 628 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 C1orf220Q5T0J3 134 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 SPOPLQ6IQ16 392 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 SCARA5Q6ZMJ2 495 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 INTS8Q75QN2 995 aaKnown RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 ACOT1Q86TX2 421 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 FAM186BQ8IYM0 893 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ARHGEF39Q8N4T4 335 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ATRIPQ8WXE1 791 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 TAF4BQ92750 862 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 TNIP3Q96KP6 325 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 KCNK16Q96T55 309 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms