RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ASCC3Q8N3C0 2202 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 PLXNA2O75051 1894 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 BCAT2O15382 392 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 TRIM16O95361 564 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 MOCS2O96007 188 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 SLC2A3P11169 496 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 CLCN1P35523 988 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 NNMTP40261 264 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 MTIF2P46199 727 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 IRAK1P51617 712 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 YWHAZP63104 245 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 PTK2Q05397 1052 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 MTA1Q13330 715 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 EXOC3L4Q17RC7 722 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 ZC3H12AQ5D1E8 599 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 MS4A13Q5J8X5 152 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 OTUD1Q5VV17 481 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 RNF219Q5W0B1 726 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 LRSAM1Q6UWE0 723 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 FAM114A1Q8IWE2 563 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 ATP6V0D2Q8N8Y2 350 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 GANCQ8TET4 914 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 RNF34Q969K3 372 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 MRGPRX3Q96LB0 322 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 KIAA1522Q9P206 1035 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 SCML1Q9UN30 329 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 FRYQ5TBA9 3013 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 TMEM131Q92545 1883 aa13.87□□□□□ -0.19
CTDSP1-212ENST00000494067 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 TP53BP1Q12888 1972 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 GTPBP10A4D1E9 387 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 FOXN3O00409 490 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 GRAP2O75791 330 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CER1O95813 267 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 ERBB2P04626 1255 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 C7P10643 843 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 ABCB4P21439 1286 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 KRT9P35527 623 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CTSOP43234 321 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CDK17Q00537 523 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 BNC1Q01954 994 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 TEAD4Q15561 434 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 PTPN20Q4JDL3 420 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 DCAF6Q58WW2 860 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 EFHC1Q5JVL4 640 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 ZNF776Q68DI1 518 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CHSY1Q86X52 802 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CIR1Q86X95 450 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 ZCCHC9Q8N567 271 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 BTN2A3PQ96KV6 586 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 PPP1R9BQ96SB3 815 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 PRMT1Q99873 361 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 SGK2Q9HBY8 427 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 PRSS16Q9NQE7 514 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.191e-8■■■■■ 33.1
CTDSP1-212ENST00000494067 EIF2B4Q9UI10 523 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 DACH1Q9UI36 760 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 CNOT1A5YKK6 2376 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-212ENST00000494067 SPAARA0A1B0GVQ0 90 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 F5H5T6 163 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 TRUB2O95900 331 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 GLI1P08151 1106 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 TFE3P19532 575 aaPredicted RBP13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 SPINK2P20155 84 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 ACSL1P33121 698 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 GGCXP38435 758 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 MATKP42679 507 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 OXCT1P55809 520 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 FAM193AP78312 1265 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 GRIK2Q13002 908 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 OLFML1Q6UWY5 402 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 APCDD1Q8J025 514 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 DEFB106AQ8N104 65 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 OR52K2Q8NGK3 314 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 TTC17Q96AE7 1141 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 SLC2A13Q96QE2 648 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 PDCL3Q9H2J4 239 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 FAM204AQ9H8W3 233 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 ANLNQ9NQW6 1124 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
CTDSP1-212ENST00000494067 FHOD1Q9Y613 1164 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms