RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 R4GN57 208 aa12.06□□□□□ -0.48
UBA3-211ENST00000493957 RTN2O75298 545 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ENDOD1O94919 500 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 GZMAP12544 262 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ABCB4P21439 1286 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 GPD1P21695 349 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 SDC4P31431 198 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 PTPN9P43378 593 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 TNFRSF4P43489 277 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 CCR3P51677 355 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 HDAC4P56524 1084 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 MAMLD1Q13495 774 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 AUHQ13825 339 aaKnown RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 DMC1Q14565 340 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 FSCBQ5H9T9 825 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 PLEKHA7Q6IQ23 1121 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 FBXL22Q6P050 247 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ZNF683Q8IZ20 524 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 CARNMT1Q8N4J0 409 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 CCDC185Q8N715 623 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ZNF513Q8N8E2 541 aaPredicted RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 HJURPQ8NCD3 748 aaPredicted RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 FAM172AQ8WUF8 416 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ATOH1Q92858 354 aaPredicted RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 LMLNQ96KR4 655 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 PRRX2Q99811 253 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 IER2Q9BTL4 223 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 SIK2Q9H0K1 926 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ISCUQ9H1K1 167 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 WDCPQ9H6R7 721 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 ABCB8Q9NUT2 735 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 MYO1AQ9UBC5 1043 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 CNOT8Q9UFF9 292 aaKnown RBP12.05□□□□□ -0.48
UBA3-211ENST00000493957 FBXO4Q9UKT5 387 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 VANGL2Q9ULK5 521 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 SLC27A6Q9Y2P4 619 aa12.05□□□□□ -0.48
UBA3-211ENST00000493957 TNRC6BQ9UPQ9 1833 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 WASH3PC4AMC7 463 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 F5H5T6 163 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 CNTN5O94779 1100 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 SLC2A3P11169 496 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 FNTBP49356 437 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 MRPS21P82921 87 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 GFPT1Q06210 699 aaPredicted RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 LMAN2Q12907 356 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 FUT11Q495W5 492 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 BRMS1LQ5PSV4 323 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 DAB2IPQ5VWQ8 1189 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 SND1Q7KZF4 910 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBA3-211ENST00000493957 SYT13Q7L8C5 426 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 MFN1Q8IWA4 741 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 OR52K2Q8NGK3 314 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 CYB5D2Q8WUJ1 264 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 CENPIQ92674 756 aaPredicted RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 NELL1Q92832 810 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 ARHGEF26Q96DR7 871 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 VCPIP1Q96JH7 1222 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 PACSIN1Q9BY11 444 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 CACNA2D2Q9NY47 1150 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 GGA2Q9UJY4 613 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 INTS6Q9UL03 887 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 MMP17Q9ULZ9 603 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 BZW2Q9Y6E2 419 aaKnown RBP12.04□□□□□ -0.48
UBA3-211ENST00000493957 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
UBA3-211ENST00000493957 GON4LQ3T8J9 2241 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 TMEM191CA6NGB0 347 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 LUC7L3O95232 432 aaKnown RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 PAPSS2O95340 614 aaPredicted RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 F9P00740 461 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 PABPC1P11940 636 aaKnown RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 ZNF143P52747 638 aaPredicted RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 ASTE1Q2TB18 679 aaPredicted RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 ALFQ53S48 1182 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 MPP7Q5T2T1 576 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 KIAA1211LQ6NV74 962 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 DCUN1D2Q6PH85 259 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 CHST9Q7L1S5 443 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 STRADAQ7RTN6 431 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 ANKS1BQ7Z6G8 1248 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 KIAA0907Q7Z7F0 614 aaPredicted RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 ADIPOR2Q86V24 386 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 ARFGAP1Q8N6T3 406 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBA3-211ENST00000493957 TC2NQ8N9U0 490 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 ACDQ96AP0 544 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 RPRD1AQ96P16 312 aaPredicted RBP12.03□□□□□ -0.48
UBA3-211ENST00000493957 SLC2A11Q9BYW1 496 aa12.03□□□□□ -0.48
UBA3-211ENST00000493957 CIPCQ9C0C6 399 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms