RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PCDHGB6Q9Y5F9 930 aa4.74□□□□□ -1.65
SMC4-223ENST00000493695 FOXO6A8MYZ6 492 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 CBFA2T3O75081 653 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 SGPL1O95470 568 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 WNT1P04628 370 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 HOXD3P31249 432 aaPredicted RBP4.73□□□□□ -1.65
SMC4-223ENST00000493695 FAM193AP78312 1265 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 GALNT3Q14435 633 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 SLC16A12Q6ZSM3 486 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 CADM3Q8N126 398 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
SMC4-223ENST00000493695 SRFBP1Q8NEF9 429 aaKnown RBP4.73□□□□□ -1.65
SMC4-223ENST00000493695 WBP1Q96G27 269 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 MSLNLQ96KJ4 702 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 ZNF347Q96SE7 839 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 APOL5Q9BWW9 433 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 MAP6D1Q9H9H5 199 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 FBXO28Q9NVF7 368 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 CORO2BQ9UQ03 480 aa4.73□□□□□ -1.65
SMC4-223ENST00000493695 GOLGA6CA6NDK9 693 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 GOLGA6BA6NDN3 693 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 BTBD18B2RXH4 712 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 TPP1O14773 563 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 KLKB1P03952 638 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 GOLGA6DP0CG33 693 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 ERVFC1-1P60608 527 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 GBX1Q14549 363 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 SHBQ15464 509 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 GFOD2Q3B7J2 385 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 KIAA1755Q5JYT7 1200 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 FNBP1LQ5T0N5 605 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 TLDC1Q6P9B6 456 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 SPSB3Q6PJ21 355 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 MAGEB5Q9BZ81 275 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 RETREG1Q9H6L5 497 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 SPAG4Q9NPE6 437 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 GOLGA6AQ9NYA3 693 aa4.72□□□□□ -1.65
SMC4-223ENST00000493695 RGS17Q9UGC6 210 aaPredicted RBP4.72□□□□□ -1.65
SMC4-223ENST00000493695 CXorf65A6NEN9 183 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 KIF3BO15066 747 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 RGS14O43566 566 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 SPRY3O43610 288 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 CNTN5O94779 1100 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 SRGAP2BP0DMP2 458 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 TGM2P21980 687 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 SLC37A1P57057 533 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 GPS2Q13227 327 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 HLTFQ14527 1009 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMC4-223ENST00000493695 HSP90AB2PQ58FF8 381 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 ALG10Q5BKT4 473 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 ALG10BQ5I7T1 473 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 MRNIPQ6NTE8 343 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 CREB3L2Q70SY1 520 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 CHST15Q7LFX5 561 aaPredicted RBP4.71□□□□□ -1.66
SMC4-223ENST00000493695 TTC30AQ86WT1 665 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 KAT2AQ92830 837 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 MAGEH1Q9H213 219 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 OBP2AQ9NY56 170 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 TNFSF13BQ9Y275 285 aa4.71□□□□□ -1.66
SMC4-223ENST00000493695 PLSCR5A0PG75 271 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 SRRM3A6NNA2 597 aaPredicted RBP4.7□□□□□ -1.66
SMC4-223ENST00000493695 SMTNL1A8MU46 457 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 MSI1O43347 362 aaKnown RBP4.7□□□□□ -1.66
SMC4-223ENST00000493695 DDNO94850 711 aaPredicted RBP4.7□□□□□ -1.66
SMC4-223ENST00000493695 PLGP00747 810 aaPredicted RBP4.7□□□□□ -1.66
SMC4-223ENST00000493695 HRGP04196 525 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 IDEP14735 1019 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 PDLIM4P50479 330 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 DSC1Q08554 894 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 GALEQ14376 348 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 FAM76BQ5HYJ3 339 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 ENTPD8Q5MY95 495 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 DNTTIP2Q5QJE6 756 aaKnown RBP4.7□□□□□ -1.66
SMC4-223ENST00000493695 ASPHD1Q5U4P2 390 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 C16orf89Q6UX73 402 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 PIK3AP1Q6ZUJ8 805 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 CCDC28AQ8IWP9 274 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 CCDC33Q8N5R6 958 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 OR52N4Q8NGI2 321 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 CATSPERBQ9H7T0 1116 aa4.7□□□□□ -1.66
SMC4-223ENST00000493695 A0A087WZ62 844 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 PPP6R2O75170 966 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 ZBTB11O95625 1053 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 VIPP01282 170 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 ARSBP15848 533 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 RPL17P18621 184 aaKnown RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 ATF3P18847 181 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 MST1P26927 711 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 TBX4P57082 545 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 ARHGAP15Q53QZ3 475 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 C10orf76Q5T2E6 689 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 KLHDC7AQ5VTJ3 777 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 DCAF12L2Q5VW00 463 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 FAM83HQ6ZRV2 1179 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 DGKHQ86XP1 1220 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 GABPB2Q8TAK5 448 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 INPP4AQ96PE3 977 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 POLDIP3Q9BY77 421 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms