RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRKAB2O43741 272 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SCO2O43819 266 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SORBS2O94875 1100 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SNRPAP09012 282 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CD48P09326 243 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CETPP11597 493 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ITIH2P19823 946 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MUTP22033 750 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DRG2P55039 364 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 ARHGAP8P85298 464 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PLIN5Q00G26 463 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SNTA1Q13424 505 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 COG2Q14746 738 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 GEN1Q17RS7 908 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 C5orf22Q49AR2 442 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 FAM47CQ5HY64 1035 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 KCNT1Q5JUK3 1230 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TRAPPC3LQ5T215 181 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 POC5Q8NA72 575 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 OR8K3Q8NH51 312 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 BAP1Q92560 729 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TMA16Q96EY4 203 aaKnown RBP7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM87BQ96K49 555 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 KLHL32Q96NJ5 620 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DACH2Q96NX9 599 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 CDADC1Q9BWV3 514 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 NYXQ9GZU5 481 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 WWP1Q9H0M0 922 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SYTL2Q9HCH5 934 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TIGARQ9NQ88 270 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DNAJC28Q9NX36 388 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PADI4Q9UM07 663 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 PSMD13Q9UNM6 376 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 DOCK1Q14185 1865 aa7.03□□□□□ -1.28
VPS13B-205ENST00000493587 AREL1O15033 823 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CFLARO15519 480 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 IL1R1P14778 569 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 IFNAR1P17181 557 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RBL1P28749 1068 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ACOT2P49753 483 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SEPHS1P49903 392 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ETV1P50549 477 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PRKAA2P54646 552 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TNFAIP2Q03169 654 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SCRN3Q0VDG4 424 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TROAPQ12815 778 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF267Q14586 743 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 INAVAQ3KP66 663 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SHEQ5VZ18 495 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ANKRD26P1Q6NSI1 321 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PGM2L1Q6PCE3 622 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 UNC5DQ6UXZ4 953 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RNF111Q6ZNA4 994 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TPH2Q8IWU9 490 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PHC2Q8IXK0 858 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 FAM47BQ8NA70 645 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 FANCBQ8NB91 859 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 MINDY2Q8NBR6 621 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ST8SIA2Q92186 375 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PPWD1Q96BP3 646 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CEP95Q96GE4 821 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 C17orf62Q9BQA9 187 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PSD2Q9BQI7 771 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PNPLA3Q9NST1 481 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 BMP2KQ9NSY1 1161 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PAQR5Q9NXK6 330 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 NINJ2Q9NZG7 142 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CCDC195A0A1B0GUA6 201 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 A8MV72 311 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TRAF5O00463 557 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 NKRFO15226 690 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 YKT6O15498 198 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ARHGEF9O43307 516 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CLPXO76031 633 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 GSNP06396 782 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 FGFR3P22607 806 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 NR2C2P49116 596 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RPS8P62241 208 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 GSTO1P78417 241 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 GALK2Q01415 458 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 KRT17Q04695 432 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF33BQ06732 778 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 DBPQ10586 325 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SLC13A2Q13183 592 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CCNIQ14094 377 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ASTE1Q2TB18 679 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 Q3C1V9 767 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 LRIT3Q3SXY7 679 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 NT5DC3Q86UY8 548 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TRABD2AQ86V40 505 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 HERC6Q8IVU3 1022 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RASGEF1CQ8N431 466 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 PSMA8Q8TAA3 256 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms