RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 F5H5T6 163 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 GDF9O60383 454 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 PAGE1O75459 146 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 H2AFZP0C0S5 128 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 TACR2P21452 398 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 GGCXP38435 758 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 CXCR3P49682 368 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 OGDHQ02218 1023 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 MTA1Q13330 715 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 EIF4EBP2Q13542 120 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 MPPE1Q53F39 396 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 RAB6CQ53S08 254 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 SH3PXD2AQ5TCZ1 1133 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 GRAMD4Q6IC98 578 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 H2AFVQ71UI9 128 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 STRADAQ7RTN6 431 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 LGI2Q8N0V4 545 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 HJURPQ8NCD3 748 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 AZIN2Q96A70 460 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 ARHGEF26Q96DR7 871 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 PGAP3Q96FM1 320 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 LOXL4Q96JB6 756 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 PRICKLE1Q96MT3 831 aaPredicted RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 XPO6Q96QU8 1125 aaKnown RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 CNPY3Q9BT09 278 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 NUP85Q9BW27 656 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 PACSIN1Q9BY11 444 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 TKTL2Q9H0I9 626 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 RAB6CQ9H0N0 254 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 WDCPQ9H6R7 721 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 STOML2Q9UJZ1 356 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 CNOT1A5YKK6 2376 aaKnown RBP11.99□□□□□ -0.49
CTSA-209ENST00000493522 USP24Q9UPU5 2620 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 SOWAHDA6NJG2 315 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CACNG3O60359 315 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TBL1XO60907 577 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 ATG13O75143 517 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TULP3O75386 442 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 APODP05090 189 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CYP1A2P05177 515 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CYLC1P35663 651 aaPredicted RBP11.98□□□□□ -0.49
CTSA-209ENST00000493522 EIF2DP41214 584 aaKnown RBP11.98□□□□□ -0.49
CTSA-209ENST00000493522 SLC6A11P48066 632 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 GALK1P51570 392 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 SGSHP51688 502 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 LIMK1P53667 647 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 HDAC4P56524 1084 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 GRSF1Q12849 480 aaKnown RBP eCLIP11.98□□□□□ -0.494e-6■■□□□ 12
CTSA-209ENST00000493522 TMEM196Q5HYL7 178 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 MS4A13Q5J8X5 152 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 PIK3R6Q5UE93 754 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 FSTL4Q6MZW2 842 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 BNIPLQ7Z465 357 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TMA16Q96EY4 203 aaKnown RBP11.98□□□□□ -0.49
CTSA-209ENST00000493522 PNKPQ96T60 521 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TRIM7Q9C029 511 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 SIK2Q9H0K1 926 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 ARHGEF4Q9NR80 690 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TMPRSS4Q9NRS4 437 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 TMEM51Q9NW97 253 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 C2orf42Q9NWW7 574 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 ARHGEF38Q9NXL2 777 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 STIM2Q9P246 746 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CTTNBP2NLQ9P2B4 639 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 DEC1Q9P2X7 70 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 ANAPC7Q9UJX3 599 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CHD5Q8TDI0 1954 aa11.98□□□□□ -0.49
CTSA-209ENST00000493522 CEP295Q9C0D2 2601 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 RPP40O75818 363 aaKnown RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 ENDOD1O94919 500 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 IPO7O95373 1038 aaKnown RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 EGFP01133 1207 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 PENKP01210 267 aaPredicted RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 DRD1P21728 446 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 FECHP22830 423 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 HOXD9P28356 352 aaPredicted RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 DGKGP49619 791 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 RPS24P62847 133 aaKnown RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 ZNF252P-AS1Q0IIN9 211 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 SPA17Q15506 151 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 ARL13BQ3SXY8 428 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 RABGAP1LQ5R372 815 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 SCYL2Q6P3W7 929 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 TMTC1Q8IUR5 882 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 ETFBKMTQ8IXQ9 262 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 CFAP52Q8N1V2 620 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 CCDC185Q8N715 623 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 ZNF564Q8TBZ8 553 aaPredicted RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 GAB3Q8WWW8 586 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 P2RY11Q96G91 374 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 IRX2Q9BZI1 471 aaPredicted RBP11.97□□□□□ -0.49
CTSA-209ENST00000493522 ARRDC1-AS1Q9H2J1 176 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 FBRSL1Q9HCM7 1045 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms