RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 CNTNAP1P78357 1384 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 BRCA1P38398 1863 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 PMS2P1A4D2B8 440 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 MBD3L5A6NJ08 208 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 DRGXA6NNA5 263 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 PRR5-ARHGAP8B1AHC4 643 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 MATN2O00339 956 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 HNRNPRO43390 633 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 DHX16O60231 1041 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 CCNDBP1O95273 360 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 GCP02774 474 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 WEE2P0C1S8 567 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 SPATA31D3P0C874 917 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 HSPA8P11142 646 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 ACP5P13686 325 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 PRKAR1BP31321 381 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 THBS4P35443 961 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 PBX1P40424 430 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 CHN2P52757 468 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 RNASELQ05823 741 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 DLX2Q07687 328 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 STK4Q13043 487 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 CLCA4Q14CN2 919 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 SLC10A5Q5PT55 438 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 NAA16Q6N069 864 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 CLEC9AQ6UXN8 241 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 SPATA31D4Q6ZUB0 917 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 RALYLQ86SE5 291 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 FAM83AQ86UY5 434 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 CNTROBQ8N137 903 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 MARS2Q96GW9 593 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 CNDP2Q96KP4 475 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 PHACTR3Q96KR7 559 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 ZNF512Q96ME7 567 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 PIGSQ96S52 555 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 SERHL2Q9H4I8 314 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 MROH8Q9H579 483 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 BEX4Q9NWD9 120 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 CTTNBP2NLQ9P2B4 639 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 CHORDC1Q9UHD1 332 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 SARDHQ9UL12 918 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 HDAC5Q9UQL6 1122 aa5.63□□□□□ -1.51
SND1-216ENST00000492840 POLR3AO14802 1390 aaPredicted RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 CPSF1Q10570 1443 aaKnown RBP5.63□□□□□ -1.51
SND1-216ENST00000492840 DOT1LQ8TEK3 1739 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 TEX51A0A1B0GUA7 166 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 A0A1W2PRX2 142 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 AGAP5A6NIR3 686 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 FAM90A7PA6NKC0 464 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 SH2D7A6NKC9 451 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 FAM90A22PA8MWA6 464 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 FAM90A12PA8MX19 464 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 FAM90A23PA8MXZ1 464 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 TGFB1I1O43294 461 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 WNT11O96014 354 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 CHN1P15882 459 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ITGALP20701 1170 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 PRKCHP24723 683 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ADORA2AP29274 412 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 BSGP35613 385 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 PSMB10P40306 273 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 GPD2P43304 727 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 GSTM5P46439 218 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 GSK3AP49840 483 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 MC2RQ01718 297 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 MTAPQ13126 283 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 THOC5Q13769 683 aaKnown RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 E2F2Q14209 437 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 AAK1Q2M2I8 961 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 DRICH1Q6PGQ1 229 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 TMPRSS9Q7Z410 1059 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 GALNTL5Q7Z4T8 443 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ZSCAN30Q86W11 494 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.62□□□□□ -1.51
SND1-216ENST00000492840 ZNF713Q8N859 430 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 C11orf44Q8N8P7 122 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 SHCBP1Q8NEM2 672 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 ZNF483Q8TF39 744 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 SH3KBP1Q96B97 665 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 PERPQ96FX8 193 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 VMP1Q96GC9 406 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 HAPLN3Q96S86 360 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 MCOLN1Q9GZU1 580 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 SIL1Q9H173 461 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 SYNPO2LQ9H987 977 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 AGO3Q9H9G7 860 aaKnown RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 HCFC1R1Q9NWW0 138 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 HSFX1Q9UBD0 423 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 SNX14Q9Y5W7 946 aa5.62□□□□□ -1.51
SND1-216ENST00000492840 N4BP2Q86UW6 1770 aaPredicted RBP5.62□□□□□ -1.51
SND1-216ENST00000492840 FAM181BA6NEQ2 426 aa5.61□□□□□ -1.51
SND1-216ENST00000492840 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
SND1-216ENST00000492840 UBE2CO00762 179 aa5.61□□□□□ -1.51
SND1-216ENST00000492840 SUN1O94901 812 aa5.61□□□□□ -1.51
SND1-216ENST00000492840 WDR47O94967 919 aa5.61□□□□□ -1.51
SND1-216ENST00000492840 DRD1P21728 446 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms