RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CST6	Q15828	149 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	SNX30	Q5VWJ9	437 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	TCTN3	Q6NUS6	607 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.63	□□□□□ -1.51	3e-11	■■■□□ 16.6
SEC13-219	ENST00000492602	GDF7	Q7Z4P5	450 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MMAA	Q8IVH4	418 aa	Known RBP	5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	CCDC13	Q8IYE1	715 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	FAM177A1	Q8N128	213 aa	Predicted RBP	5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM161B	Q8NDZ6	487 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	SCAMP5	Q8TAC9	235 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	ERMN	Q8TAM6	284 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	WASF1	Q92558	559 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	NKD1	Q969G9	470 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MYOC	Q99972	504 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MSTO1	Q9BUK6	570 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	CALN1	Q9BXU9	219 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	ASB7	Q9H672	318 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	DNAJC28	Q9NX36	388 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MAP10	Q9P2G4	905 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	SUN2	Q9UH99	717 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	CDH9	Q9ULB4	789 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	FZD4	Q9ULV1	537 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	AGAP1	Q9UPQ3	857 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	DMTF1	Q9Y222	760 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MAP4K5	Q9Y4K4	846 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	CYP46A1	Q9Y6A2	500 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	MYH10	P35580	1976 aa		5.63	□□□□□ -1.51
SEC13-219	ENST00000492602	TDRD6	O60522	2096 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	HEATR9	A2RTY3	570 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	C10orf142	B7Z368	130 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	PRAMEF26	H0Y7S4	382 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	MKRN2OS	H3BPM6	223 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	NTN3	O00634	580 aa	Predicted RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	HNRNPDL	O14979	420 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	EPB41L2	O43491	1005 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	DUX1	O43812	170 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	NEMF	O60524	1076 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	CYBB	P04839	570 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	ITGB3	P05106	788 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	MAPT	P10636	758 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	PLCG1	P19174	1290 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	RPS6KB1	P23443	525 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	GUCY2C	P25092	1073 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	PDIA3	P30101	505 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC8A1	P32418	973 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	NOS2	P35228	1153 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	CHKA	P35790	457 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	ATP5C1	P36542	298 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	LEPR	P48357	1165 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	RPIA	P49247	311 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	ACOT2	P49753	483 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	HNRNPK	P61978	463 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	ANKRD1	Q15327	319 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	BMT2	Q1RMZ1	405 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	SOWAHA	Q2M3V2	549 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	DEFB133	Q30KQ1	61 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	MDH1B	Q5I0G3	518 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM164	Q5U3C3	297 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602		Q6ZNB5	142 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	CHST9	Q7L1S5	443 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	TOP6BL	Q8N6T0	577 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	MYCBPAP	Q8TBZ2	947 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	GPBAR1	Q8TDU6	330 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	DDI1	Q8WTU0	396 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	NAT6	Q93015	286 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM74	Q96NL1	305 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	GFM1	Q96RP9	751 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	MDFI	Q99750	246 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	NTPCR	Q9BSD7	190 aa	Known RBP	5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC29A3	Q9BZD2	475 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	C17orf75	Q9HAS0	396 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	ZSWIM6	Q9HCJ5	1215 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	BRMS1	Q9HCU9	246 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	LATS2	Q9NRM7	1088 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM30A	Q9NV96	361 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	CYTH4	Q9UIA0	394 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	GGT7	Q9UJ14	662 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	SALL4	Q9UJQ4	1053 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	KCND3	Q9UK17	655 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602	RP1	P56715	2156 aa		5.62	□□□□□ -1.51
SEC13-219	ENST00000492602		A0A0B4J269	797 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602		D6RAR5	112 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	PRSS44	E7EML9	344 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	MDM4	O15151	490 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SIN3B	O75182	1162 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KRT19	P08727	400 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	OR52Z1	P0C646	297 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	ZDHHC11B	P0C7U3	371 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	GOT1	P17174	413 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	OAS2	P29728	719 aa	Known RBP	5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	CDC25A	P30304	524 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	HLA-F	P30511	346 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	CCKBR	P32239	447 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	NUDT1	P36639	197 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	PSMD8	P48556	350 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	PGF	P49763	221 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC5A3	P53794	718 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	TFAM	Q00059	246 aa	Known RBP	5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	RAD51AP2	Q09MP3	1159 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms