RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 AGTR2P50052 363 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCR5P51681 352 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 RBM6P78332 1123 aaKnown RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 TLE3Q04726 772 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 PDCLQ13371 301 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 BIRC3Q13489 604 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 EFR3AQ14156 821 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 MFSD13AQ14CX5 517 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM110CQ1W6H9 321 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 LRRC24Q50LG9 513 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 DLK2Q6UY11 383 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 DCDC5Q6ZRR9 648 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 TFAP2DQ7Z6R9 452 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 TTC30AQ86WT1 665 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CHSY1Q86X52 802 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 SMAP1Q8IYB5 467 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM71DQ8N9W8 422 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 PNISRQ8TF01 805 aaKnown RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 NSMCE1Q8WV22 266 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 AFG1LQ8WV93 481 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 ASB12Q8WXK4 309 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 C3orf49Q96BT1 292 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 SDCCAG3Q96C92 435 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 DAZAP1Q96EP5 407 aaKnown RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 REXO5Q96IC2 774 aaKnown RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAR2Q96K12 515 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 EIF3CQ99613 913 aaKnown RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CINPQ9BW66 212 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 SH3BP4Q9P0V3 963 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 B3GNT3Q9Y2A9 372 aa3.28□□□□□ -1.88
HMGB1P30-201ENST00000492455 CYP3A7-CYP3A51PA0A087WV96 503 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 MBD3L5A6NJ08 208 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 EFCAB8A8MWE9 144 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 EYA2O00167 538 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 RRHO14718 337 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRT38O76015 456 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 TOP3BO95985 862 aaKnown RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 CSF1P09603 554 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRT10P13645 584 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 MATN1P21941 496 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 SCP2P22307 547 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 PAX3P23760 479 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 CYP3A7P24462 503 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF84P51523 738 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ACTR2P61160 394 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 DMWDQ09019 674 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 KCNB1Q14721 858 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF484Q5JVG2 852 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 DENND2CQ68D51 928 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 LRRTM4Q86VH4 590 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF354CQ86Y25 554 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 C2CD5Q86YS7 1000 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 RFX6Q8HWS3 928 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ANKRD18AQ8IVF6 992 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ADGRF3Q8IZF5 1079 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF398Q8TD17 642 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 CPT1BQ92523 772 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 RUBCNQ92622 972 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 AKAP1Q92667 903 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 KTI12Q96EK9 354 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 TWNKQ96RR1 684 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 NPAS1Q99742 590 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 RNF26Q9BY78 433 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 BRD8Q9H0E9 1235 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 PLEKHA2Q9HB19 425 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 RASSF1Q9NS23 344 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 LIN7CQ9NUP9 197 aaKnown RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 C9orf78Q9NZ63 289 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 NDUFAF4Q9P032 175 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC12A4Q9UP95 1085 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 PCDHA10Q9Y5I2 948 aa3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 LRRFIP2Q9Y608 721 aaKnown RBP3.27□□□□□ -1.89
HMGB1P30-201ENST00000492455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 BTBD19C9JJ37 291 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 STX16-NPEPL1H3BU86 382 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SMIM22K7EJ46 135 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 STX16O14662 325 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 LATS1O95835 1130 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 TFRCP02786 760 aaKnown RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 CNPP09543 421 aaKnown RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RFPL3SP0C7P2 107 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 LYL1P12980 280 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 ACP5P13686 325 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 HOXD12P35452 270 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC37A1P57057 533 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SHC2P98077 582 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RABEP1Q15276 862 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RPS6KA2Q15349 733 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 ADCK5Q3MIX3 580 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBRG1Q3YBR2 411 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SUPT20HL1Q3ZLR7 823 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC2A7Q6PXP3 512 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RTL10Q7L3V2 364 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMTC1Q8IUR5 882 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 NGDNQ8NEJ9 315 aaKnown RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 IL17REQ8NFR9 667 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 P2RY11Q96G91 374 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF845Q96IR2 970 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms