RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 C6orf106Q9H6K1 298 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 TM9SF3Q9HD45 589 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 ADAMTS1Q9UHI8 967 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 FZD4Q9ULV1 537 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 CNTN6Q9UQ52 1028 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 ANKRD6Q9Y2G4 727 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 FAM208BQ5VWN6 2430 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 A0A1B0GVT2 93 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 C10orf142B7Z368 130 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 VILLO15195 856 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 YKT6O15498 198 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 TBL1XO60907 577 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 GABBR2O75899 941 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 MOCS3O95396 460 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 HLA-EP13747 358 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 GRK6P43250 576 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 CSNK1EP49674 416 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 CCT8P50990 548 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 OXCT1P55809 520 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 RACK1P63244 317 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 C1QBPQ07021 282 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 SCAPQ12770 1279 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 KIF19Q2TAC6 998 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 KIAA0895LQ68EN5 471 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 SLCO6A1Q86UG4 719 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 MFN1Q8IWA4 741 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 RHBDD1Q8TEB9 315 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 CYB5D2Q8WUJ1 264 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 ERLEC1Q96DZ1 483 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 SLC39A13Q96H72 371 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 MED15Q96RN5 788 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 PABPC3Q9H361 631 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 IL21RQ9HBE5 538 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 FNDC3AQ9Y2H6 1198 aaKnown RBP9.47□□□□□ -0.89
HDAC3-212ENST00000492407 PCDHB4Q9Y5E5 795 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 SPEGQ15772 3267 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 CACNA1EQ15878 2313 aa9.47□□□□□ -0.89
HDAC3-212ENST00000492407 IGF2RP11717 2491 aa9.46□□□□□ -0.89
HDAC3-212ENST00000492407 PI4KAP42356 2102 aa9.46□□□□□ -0.89
HDAC3-212ENST00000492407 A0A1W2PPC4 97 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 LRRC72A6NJI9 287 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 M0QYV0 167 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 RNF225M0QZC1 329 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 TAF4O00268 1085 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 MSI1O43347 362 aaKnown RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 MED7O43513 233 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 FYNP06241 537 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 C1SP09871 688 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SLC2A3P11169 496 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SLC6A4P31645 630 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 CD70P32970 193 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 NUDT1P36639 197 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 CTSKP43235 329 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 GPD2P43304 727 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 CCR5P51681 352 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 PLK1P53350 603 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 NUCB2P80303 420 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SULT2A1Q06520 285 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 LRMPQ12912 555 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 CCDC40Q4G0X9 1142 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 MS4A13Q5J8X5 152 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 ENOSF1Q7L5Y1 443 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 TMEM110Q86TL2 294 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 FAM124AQ86V42 546 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 PPM1KQ8N3J5 372 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 DQX1Q8TE96 717 aaKnown RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 MYO19Q96H55 970 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 FCRL2Q96LA5 508 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 MRGPRX3Q96LB0 322 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 ZSWIM1Q9BR11 485 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 ACE2Q9BYF1 805 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-212ENST00000492407 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 LHX6Q9UPM6 363 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 PCDHGA1Q9Y5H4 931 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 SNX11Q9Y5W9 270 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 GON4LQ3T8J9 2241 aa9.46□□□□□ -0.9
HDAC3-212ENST00000492407 DMXL2Q8TDJ6 3036 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 CKAP5Q14008 2032 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 A0A1B0GTQ1 180 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 EDDM13A0A1B0GTR0 161 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 GOLGA6L7A0A1B0GV03 622 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 TRIM49BA6NDI0 452 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 FSBPO95073 299 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 LUC7L3O95232 432 aaKnown RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 FGFR1OPO95684 399 aaKnown RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ADH1BP00325 375 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 APOEP02649 317 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms