RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 RRM1P23921 792 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 NOS2P35228 1153 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 IRX4P78413 519 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 RING1Q06587 406 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 EIF4EBP2Q13542 120 aaPredicted RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 DCAF6Q58WW2 860 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 SPDYCQ5MJ68 293 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 PPP1R15BQ5SWA1 713 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 SYPL2Q5VXT5 272 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 PEAR1Q5VY43 1037 aaPredicted RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 PSAPL1Q6NUJ1 521 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 ALKBH5Q6P6C2 394 aaKnown RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 TRMT11Q7Z4G4 463 aaKnown RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 DEFB106AQ8N104 65 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 NT5C3BQ969T7 300 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 CCDC42Q96M95 316 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 ACOX2Q99424 681 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 BBS2Q9BXC9 721 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 DEF6Q9H4E7 631 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 METTL5Q9NRN9 209 aaKnown RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 TMEM74BQ9NUR3 256 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 LSM7Q9UK45 103 aaKnown RBP15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 TLR6Q9Y2C9 796 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 USP24Q9UPU5 2620 aa15.58■□□□□ 0.08
CDC42SE1-205ENST00000491825 MAP1BP46821 2468 aaKnown RBP15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SIGLEC16A6NMB1 481 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TMCO5BA8MYB1 307 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 GOLGA8SH3BPF8 625 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 IRAK2O43187 625 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 GRAP2O75791 330 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 STC2O76061 302 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 CISD3P0C7P0 127 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 HOXB2P14652 356 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 NTSR1P30989 418 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 FLT3P36888 993 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 GSDMDP57764 484 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 GFPT1Q06210 699 aaPredicted RBP15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TRIP4Q15650 581 aaPredicted RBP15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 PLEKHA7Q6IQ23 1121 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 DNAJC24Q6P3W2 148 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TPGS1Q6ZTW0 290 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 ARMCX6Q7L4S7 300 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 LPCAT2Q7L5N7 544 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 BNIPLQ7Z465 357 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TAC4Q86UU9 113 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SYT12Q8IV01 421 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TMEFF1Q8IYR6 380 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SPC24Q8NBT2 197 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 PIGKQ92643 395 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 PGAP3Q96FM1 320 aaPredicted RBP15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 GABRG3Q99928 467 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SELENOOQ9BVL4 669 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 TMEM9BQ9NQ34 198 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 PARVAQ9NVD7 372 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 CALCOCO1Q9P1Z2 691 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SFMBT1Q9UHJ3 866 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 FBXO10Q9UK96 956 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 STAP1Q9ULZ2 295 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 SCINQ9Y6U3 715 aa15.57■□□□□ 0.08
CDC42SE1-205ENST00000491825 CEP295Q9C0D2 2601 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 FRYQ5TBA9 3013 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 SLC12A8A0AV02 714 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 FAM170AA1A519 330 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 C2CD4BA6NLJ0 364 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 GIPC1O14908 333 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 MSI1O43347 362 aaKnown RBP15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 AKR1B10O60218 316 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 LCA5LO95447 670 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 LATS1O95835 1130 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 TRUB2O95900 331 aaKnown RBP15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 KLKB1P03952 638 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 KRT3P12035 628 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 WASP42768 502 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 NOVA1P51513 510 aaKnown RBP15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 GSE1Q14687 1217 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 SLC25A52Q3SY17 297 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 TRIM61Q5EBN2 209 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 OTUD1Q5VV17 481 aaPredicted RBP15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 DAB2IPQ5VWQ8 1189 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 LYSMD4Q5XG99 296 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 NUGGCQ68CJ6 796 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 TRNP1Q6NT89 227 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 KIAA1211LQ6NV74 962 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 NUDT18Q6ZVK8 323 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 TMTC1Q8IUR5 882 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 ZNF653Q96CK0 615 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 SLC39A13Q96H72 371 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 XPO6Q96QU8 1125 aaKnown RBP15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 NPY6RQ99463 290 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 DCLK3Q9C098 648 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 PILRBQ9UKJ0 227 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 ZNF510Q9Y2H8 683 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 MYOFQ9NZM1 2061 aa15.56■□□□□ 0.08
CDC42SE1-205ENST00000491825 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
CDC42SE1-205ENST00000491825 ANKRD62A6NC57 917 aa15.55■□□□□ 0.08
CDC42SE1-205ENST00000491825 PENKP01210 267 aaPredicted RBP15.55■□□□□ 0.08
CDC42SE1-205ENST00000491825 NDUFV2P19404 249 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms