RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 C1orf53Q5VUE5 145 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 BSPRYQ5W0U4 402 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 UNC5AQ6ZN44 842 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 TRPM8Q7Z2W7 1104 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
USP4-214ENST00000491791 LZTR1Q8N653 840 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 ANKRD42Q8N9B4 389 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 NDRG1Q92597 394 aaKnown RBP11.05□□□□□ -0.64
USP4-214ENST00000491791 BADQ92934 168 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 APOPT1Q96IL0 206 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 C8orf48Q96LL4 319 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 EPAS1Q99814 870 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 PAAF1Q9BRP4 392 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 PRDM12Q9H4Q4 367 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 ABCC13Q9NSE7 274 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 FGFR1OP2Q9NVK5 253 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 SLC12A4Q9UP95 1085 aa11.05□□□□□ -0.64
USP4-214ENST00000491791 RNF103O00237 685 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 SYN3O14994 580 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 AVILO75366 819 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 POMCP01189 267 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 MT-ND3P03897 115 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 USP17L7P0C7H9 530 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 NCAM1P13591 858 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 ERCC2P18074 760 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 GBP2P32456 591 aaPredicted RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 SKIV2L2P42285 1042 aaKnown RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 MAGEA11P43364 429 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 YWHAGP61981 247 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP4-214ENST00000491791 SMAD3P84022 425 aaKnown RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 TSPY1Q01534 308 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 SLC1A5Q15758 541 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 ARTNQ5T4W7 220 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 MANEALQ5VSG8 457 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 KCTD11Q693B1 232 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 CGB2Q6NT52 195 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 GLB1LQ6UWU2 654 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 MARK2Q7KZI7 788 aaKnown RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 LRRC49Q8IUZ0 686 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 COLGALT1Q8NBJ5 622 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 OR10T2Q8NGX3 314 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 ZSCAN18Q8TBC5 510 aaPredicted RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 ACMSDQ8TDX5 336 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 FATE1Q969F0 183 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 OXNAD1Q96HP4 312 aaPredicted RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 LGMNQ99538 433 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 WDCPQ9H6R7 721 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 ANLNQ9NQW6 1124 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 TMLHEQ9NVH6 421 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 TIMM13Q9Y5L4 95 aaPredicted RBP11.04□□□□□ -0.64
USP4-214ENST00000491791 IKBKGQ9Y6K9 419 aa11.04□□□□□ -0.64
USP4-214ENST00000491791 FAM92AA1XBS5 289 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 MAGEB16A2A368 324 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 WASH4PA8MWX3 477 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 FAM72CH0Y354 149 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 IRAK2O43187 625 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 PSMD3O43242 534 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 SPAG7O75391 227 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 KRT38O76015 456 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 TGDSO95455 350 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 AP2A1O95782 977 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 CLTBP09497 229 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 RAG1P15918 1043 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 PTPN3P26045 913 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 BRCC3P46736 316 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 SCTRP47872 440 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 TPI1P60174 286 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 COG7P83436 770 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 TLE2Q04725 743 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 CDK18Q07002 472 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 NIPAL4Q0D2K0 466 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 FAAP100Q0VG06 881 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 NME3Q13232 169 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 EFTUD2Q15029 972 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP4-214ENST00000491791 NFE2Q16621 373 aaPredicted RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 ACBD5Q5T8D3 534 aaPredicted RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 RNF187Q5TA31 235 aaPredicted RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 FAM72AQ5TYM5 149 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 HHATQ5VTY9 493 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 FAM72DQ6L9T8 149 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 MSANTD2Q6P1R3 559 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 LVRNQ6Q4G3 990 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 FAM72BQ86X60 149 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 C10orf67Q8IYJ2 551 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 COLGALT2Q8IYK4 626 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 DCP1BQ8IZD4 617 aaKnown RBP11.03□□□□□ -0.64
USP4-214ENST00000491791 ZNF567Q8N184 647 aa11.03□□□□□ -0.64
USP4-214ENST00000491791 C4orf33Q8N1A6 199 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms