RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GGA2Q9UJY4 613 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 INTS6Q9UL03 887 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 CACNA1EQ15878 2313 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 KCNU1A8MYU2 1149 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 IRAK2O43187 625 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF217O75362 1048 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 IGLV3-19P01714 112 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 ERBB2P04626 1255 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 PBX1P40424 430 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 BPIFB4P59827 614 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 PTK2Q05397 1052 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 STARD3Q14849 445 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 TSR1Q2NL82 804 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 PTPN20Q4JDL3 420 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 MBLAC2Q68D91 279 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC36A4Q6YBV0 504 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 DEFB106AQ8N104 65 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 FIBINQ8TAL6 211 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 WFIKKN2Q8TEU8 576 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 MYO19Q96H55 970 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 CAPN10Q9HC96 672 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 STIM2Q9P246 746 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
SEC61A1-206ENST00000491668 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 USP24Q9UPU5 2620 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 ADAMTS9Q9P2N4 1935 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 F8VZ95 297 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 GRAP2O75791 330 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 MOCS2O96007 188 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 EPHX1P07099 455 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 DLDP09622 509 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 CCDC172P0C7W6 258 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 TPMTP51580 245 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 ARID5AQ03989 594 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 LMAN2Q12907 356 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 DCAF6Q58WW2 860 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 FAM183BPQ6ZVS7 135 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 HJURPQ8NCD3 748 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 TTC17Q96AE7 1141 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 PRMT1Q99873 361 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 PRSS16Q9NQE7 514 aa13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-206ENST00000491668 SPEGQ15772 3267 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 A0A1W2PQJ5 194 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 FAM170AA1A519 330 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 CAPN9O14815 690 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 GIPC1O14908 333 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 ZBTB24O43167 697 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 SYNCRIPO60506 623 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 GFPT2O94808 682 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 KCNK5O95279 499 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 ENGP17813 658 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 CD6P30203 668 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 HOXD12P35452 270 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 SOX5P35711 763 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 CSKP41240 450 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 FNDC3BQ53EP0 1204 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 MFN1Q8IWA4 741 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 SIPA1Q96FS4 1042 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 TRIM62Q9BVG3 475 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 TMEM9BQ9NQ34 198 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 MYO6Q9UM54 1294 aa13.13□□□□□ -0.31
SEC61A1-206ENST00000491668 ZZEF1O43149 2961 aa13.12□□□□□ -0.31
SEC61A1-206ENST00000491668 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
SEC61A1-206ENST00000491668 HSF2BPO75031 334 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms