RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 BHMTQ93088 406 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 MRRFQ96E11 262 aaKnown RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 QKIQ96PU8 341 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 TRIM56Q9BRZ2 755 aaKnown RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 OXCT2Q9BYC2 517 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 UBE2OQ9C0C9 1292 aaKnown RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 HCFC1R1Q9NWW0 138 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 VPS18Q9P253 973 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 RCOR3Q9P2K3 495 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-219ENST00000491128 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 NUP205Q92621 2012 aa14.33□□□□□ -0.12
SMPD4-219ENST00000491128 RNF103O00237 685 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CCL16O15467 120 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ACTN2P35609 894 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ATP5C1P36542 298 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 NR2C2P49116 596 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 MLLT6P55198 1093 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF844Q08AG5 666 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 PAFAH1B3Q15102 231 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 TTMPQ5BVD1 217 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 NADSYN1Q6IA69 706 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 FBXL22Q6P050 247 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 MSANTD2Q6P1R3 559 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 VSIG1Q86XK7 387 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 DENND1CQ8IV53 801 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CDKL3Q8IVW4 592 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ZBED8Q8IZ13 594 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 AGAP3Q96P47 875 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 KLHL5Q96PQ7 755 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 HAPLN3Q96S86 360 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 TTLL2Q9BWV7 592 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 FRMD8P1Q9BZ68 369 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 FARP1Q9Y4F1 1045 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 RIPK2O43353 540 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 RNF40O75150 1001 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 APOEP02649 317 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CSH1P0DML2 217 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CSH2P0DML3 217 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 AIF1P55008 147 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ZXDBP98169 803 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 PDIA2Q13087 525 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 CAMK1Q14012 370 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 SMAD1Q15797 465 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 HSP90B2PQ58FF3 399 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 SPPL3Q8TCT6 385 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 SMG9Q9H0W8 520 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 OSBPL2Q9H1P3 480 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 PABPC3Q9H361 631 aaKnown RBP14.32□□□□□ -0.12
SMPD4-219ENST00000491128 UBP1Q9NZI7 540 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 TRPM5Q9NZQ8 1165 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF487B1APH4 448 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 KLKB1P03952 638 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 C8AP07357 584 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 IFFO1Q0D2I5 559 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 WASHC5Q12768 1159 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ZBTB17Q13105 803 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 SPARCL1Q14515 664 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 VEPH1Q14D04 833 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 TRIP4Q15650 581 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ANKRD20A2Q5SQ80 823 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 HECTD3Q5T447 861 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ANKRD20A1Q5TYW2 823 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ANKRD20A3Q5VUR7 823 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 PPIL6Q8IXY8 311 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 TCEAL8Q8IYN2 117 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ARL14EPQ8N8R7 260 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 WDR83Q9BRX9 315 aaKnown RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 SLC39A8Q9C0K1 460 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 C2orf71A6NGG8 1288 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 TSPAN3O60637 253 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 SLC6A4P31645 630 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 EPHB3P54753 998 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 BBS9Q3SYG4 887 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 DENND2CQ68D51 928 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF567Q8N184 647 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ZCCHC9Q8N567 271 aaKnown RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 EPS8L3Q8TE67 593 aaKnown RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 TBC1D31Q96DN5 1066 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF419Q96HQ0 510 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 RPRD1AQ96P16 312 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-219ENST00000491128 NINJ2Q9NZG7 142 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 DNMT3LQ9UJW3 386 aa14.31□□□□□ -0.12
SMPD4-219ENST00000491128 GABRR2P28476 465 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MAGEA10P43363 369 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PSEN1P49768 467 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 SGSHP51688 502 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MORF4L2Q15014 288 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PDK1Q15118 436 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 LONRF1Q17RB8 773 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 COL13A1Q5TAT6 717 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MANEALQ5VSG8 457 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms