RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 CEP83Q9Y592 693 aa5.09□□□□□ -1.59
EPCAM-206ENST00000490733 PCDHA11Q9Y5I1 949 aa5.09□□□□□ -1.59
EPCAM-206ENST00000490733 ALG6Q9Y672 507 aa5.09□□□□□ -1.59
EPCAM-206ENST00000490733 PRRC2BQ5JSZ5 2229 aaKnown RBP5.09□□□□□ -1.59
EPCAM-206ENST00000490733 BRWD1Q9NSI6 2320 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 FAM92AA1XBS5 289 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ANKRD33BA6NCL7 494 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 C2CD4BA6NLJ0 364 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 YJEFN3A6XGL0 299 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TMEM110-MUSTN1A8MSY1 372 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 E7ENQ6 273 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 GRAP2O75791 330 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 CSPG5O95196 566 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 CXCL14O95715 111 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 URODP06132 367 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 RB1P06400 928 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 FAM87AP0C7U9 286 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SPATA31D3P0C874 917 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 KRT3P12035 628 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ATF2P15336 505 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 COMTP21964 271 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ACADSBP45954 432 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MARCKSL1P49006 195 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SLC5A3P53794 718 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 DAOAP59103 153 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TAS2R40P59535 323 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 RNASE9P60153 205 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PITX1P78337 314 aaPredicted RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MRPS5P82675 430 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 AMPD2Q01433 879 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SLC6A3Q01959 620 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 KRT17Q04695 432 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MESDQ14696 234 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 CCDC14Q49A88 953 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PPM1JQ5JR12 505 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 FAM102AQ5T9C2 384 aaPredicted RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MEI1Q5TIA1 1274 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 LIN9Q5TKA1 542 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SYPL2Q5VXT5 272 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PLPP4Q5VZY2 271 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TXNRD3NBQ6F5E7 133 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PM20D1Q6GTS8 502 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 OR6B2Q6IFH4 312 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 KIAA1841Q6NSI8 718 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 C11orf63Q6NUN7 778 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PPP1R2P3Q6NXS1 205 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 DNAJC24Q6P3W2 148 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 LILRA6Q6PI73 481 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 VSTM1Q6UX27 236 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SPATA31D4Q6ZUB0 917 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 CYP4V2Q6ZWL3 525 aaPredicted RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SLC26A9Q7LBE3 791 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 BNIPLQ7Z465 357 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SCD5Q86SK9 330 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ZDHHC17Q8IUH5 632 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SCN4BQ8IWT1 228 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 GPR65Q8IYL9 337 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TXLNBQ8N3L3 684 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 NIPA2Q8N8Q9 360 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MRPL43Q8N983 215 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TRIM58Q8NG06 486 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ZNF461Q8TAF7 563 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SPPL2BQ8TCT7 592 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 C2orf15Q8WU43 125 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 UBXN4Q92575 508 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 ALG3Q92685 438 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 KRT35Q92764 455 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 HES6Q96HZ4 224 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 C8orf48Q96LL4 319 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 KLHL5Q96PQ7 755 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TGS1Q96RS0 853 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TCF25Q9BQ70 676 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 DNAI2Q9GZS0 605 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 NKX2-4Q9H2Z4 354 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SYNCQ9H7C4 482 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 CERS4Q9HA82 394 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 NMUR1Q9HB89 426 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 LRRC4Q9HBW1 653 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 TLR9Q9NR96 1032 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 MRPL17Q9NRX2 175 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 OSER1Q9NX31 292 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 FNIP2Q9P278 1114 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 WDR35Q9P2L0 1181 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 AFF4Q9UHB7 1163 aaKnown RBP5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PCOLCE2Q9UKZ9 415 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 STRIP2Q9ULQ0 834 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 RWDD3Q9Y3V2 267 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 PCDHB5Q9Y5E4 795 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 IRAK3Q9Y616 596 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 SCINQ9Y6U3 715 aa5.08□□□□□ -1.6
EPCAM-206ENST00000490733 DOCK4Q8N1I0 1966 aa5.07□□□□□ -1.6
EPCAM-206ENST00000490733 HELZP42694 1942 aaKnown RBP5.07□□□□□ -1.6
EPCAM-206ENST00000490733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.07□□□□□ -1.6
EPCAM-206ENST00000490733 H3BNC9 293 aa5.07□□□□□ -1.6
EPCAM-206ENST00000490733 I6L893 689 aaPredicted RBP5.07□□□□□ -1.6
EPCAM-206ENST00000490733 MYO1FO00160 1098 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms