RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 THEGLP0DJG4 465 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 ADORA2BP29275 332 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 MAT2AP31153 395 aaKnown RBP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 SLC8A1P32418 973 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 AFMP43652 599 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 NEK4P51957 841 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 MPPE1Q53F39 396 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 CLEC20AQ6ZU45 233 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TADA2BQ86TJ2 420 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 IQCHQ86VS3 1027 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 C12orf29Q8N999 325 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 WFDC5Q8TCV5 224 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 ARRDC3Q96B67 414 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.13
EXOSC3-207ENST00000490516 NOBOXO60393 691 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 RALAP11233 206 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 CD70P32970 193 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 PSMD8P48556 350 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 ANAPC15P60006 121 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 TRPC3Q13507 836 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 CLCA4Q14CN2 919 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 POM121L1PQ3SYA9 428 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 RILPL1Q5EBL4 403 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 SND1Q7KZF4 910 aaKnown RBP eCLIP14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF276Q8N554 614 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 CGRRF1Q99675 332 aa14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
EXOSC3-207ENST00000490516 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 SLC12A8A0AV02 714 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 CASC3O15234 703 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 STAU1O95793 577 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 FAM200BP0CF97 657 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 GOT1P17174 413 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 GAP43P17677 238 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 SGSHP51688 502 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 CYP4F2P78329 520 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 OVGP1Q12889 678 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 STAT4Q14765 748 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 HNRNPA1L2Q32P51 320 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 C9orf64Q5T6V5 341 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 CRTC1Q6UUV9 634 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 WDR36Q8NI36 951 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 GEMIN8Q9NWZ8 242 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 NLGN3Q9NZ94 848 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 MARCH2Q9P0N8 246 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 KIF3AQ9Y496 699 aa14.25□□□□□ -0.13
EXOSC3-207ENST00000490516 SCN8AQ9UQD0 1980 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 KIAA0391O15091 583 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 PIAS2O75928 621 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CLSTN1O94985 981 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 ITGA2BP08514 1039 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 ALPPL2P10696 532 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 SLC5A2P31639 672 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 ATICP31939 592 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 PSEN1P49768 467 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 KIF11P52732 1056 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CDKN3Q16667 212 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 RBM44Q6ZP01 1051 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CCDC186Q7Z3E2 898 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF564Q8TBZ8 553 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 GRAMD1AQ96CP6 724 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 TMA16Q96EY4 203 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 KLHDC7BQ96G42 594 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CDK5RAP1Q96SZ6 601 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 FAM129BQ96TA1 746 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 OLFML3Q9NRN5 406 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CLIC5Q9NZA1 410 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 PLEKHB1Q9UF11 243 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CYTH4Q9UIA0 394 aa14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 TPX2Q9ULW0 747 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-207ENST00000490516 CPED1A4D0V7 1026 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 TTC34A8MYJ7 566 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 K7ESM1 405 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 NEBLO76041 1014 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 IDEP14735 1019 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms