RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ADHFE1Q8IWW8 467 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TMEM174Q8WUU8 243 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 LPAR1Q92633 364 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 CENPIQ92674 756 aaPredicted RBP4.29□□□□□ -1.72
HMGN1-218ENST00000490032 MCRS1Q96EZ8 462 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TMEM204Q9BSN7 226 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 STK33Q9BYT3 514 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TASP1Q9H6P5 420 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 SFXN1Q9H9B4 322 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 TXNRD2Q9NNW7 524 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 LMTK3Q96Q04 1460 aa4.29□□□□□ -1.72
HMGN1-218ENST00000490032 FOXO6A8MYZ6 492 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 M0QYT0 321 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 MDM4O15151 490 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 CYP3A4P08684 503 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 CDC25AP30304 524 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 CIITAP33076 1130 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 GNALP38405 381 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 AK2P54819 239 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 FOXL2P58012 376 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 SHC2P98077 582 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 GPR162Q16538 588 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 TMEM88Q6PEY1 159 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 KAT2AQ92830 837 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 ATP2A3Q93084 1043 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 ZNF479Q96JC4 524 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 ZPBPQ9BS86 351 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
HMGN1-218ENST00000490032 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
HMGN1-218ENST00000490032 NFU1Q9UMS0 254 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 SLC8A2Q9UPR5 921 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 CEP83Q9Y592 693 aa4.28□□□□□ -1.72
HMGN1-218ENST00000490032 CYP3A7-CYP3A51PA0A087WV96 503 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 C4orf47A7E2U8 309 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 LACTBL1A8MY62 500 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
HMGN1-218ENST00000490032 NGFRP08138 427 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 NPPBP16860 134 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 CYP3A7P24462 503 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 TAS2R50P59544 299 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
HMGN1-218ENST00000490032 ZXDBP98169 803 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 GAD2Q05329 585 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 CYB5R4Q7L1T6 521 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 RTL10Q7L3V2 364 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 WDR60Q8WVS4 1066 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 INPP5DQ92835 1189 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 C18orf8Q96DM3 657 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 CCDC138Q96M89 665 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 CTAGE1Q96RT6 745 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 EPS8L2Q9H6S3 715 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 MAP6D1Q9H9H5 199 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 CERS4Q9HA82 394 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGN1-218ENST00000490032 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 PHTF1Q9UMS5 762 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 PCDHA7Q9UN72 937 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 ZBTB1Q9Y2K1 713 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 PCDHGB2Q9Y5G2 931 aa4.27□□□□□ -1.73
HMGN1-218ENST00000490032 KCNJ18B7U540 433 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 H0YGN5 161 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 TNFRSF13BO14836 293 aaPredicted RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 SLC28A2O43868 658 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 RPP40O75818 363 aaKnown RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 NFATC1O95644 943 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 KLKB1P03952 638 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 LCKP06239 509 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 ALDOCP09972 364 aaKnown RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 RFX2P48378 723 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 ALDH18A1P54886 795 aaKnown RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 ANKRD40Q6AI12 368 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 KDELC2Q7Z4H8 507 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 NRSN1Q8IZ57 195 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 SMRP1Q8NCR6 262 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 PARD3BQ8TEW8 1205 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 IPO4Q8TEX9 1081 aaKnown RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 KIAA1191Q96A73 305 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 MIB2Q96AX9 1013 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 REXO5Q96IC2 774 aaKnown RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 MYLK2Q9H1R3 596 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 TP63Q9H3D4 680 aaPredicted RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
HMGN1-218ENST00000490032 SELENONQ9NZV5 590 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 IGSF9Q9P2J2 1179 aa4.26□□□□□ -1.73
HMGN1-218ENST00000490032 EME2A4GXA9 379 aaPredicted RBP4.25□□□□□ -1.73
HMGN1-218ENST00000490032 NEURL1O76050 574 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 KLRK1P26718 216 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 RASSF2P50749 326 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 Q5PR19 223 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 C10orf76Q5T2E6 689 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 ERAP2Q6P179 960 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 PARM1Q6UWI2 310 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 KSR2Q6VAB6 950 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 GPSM1Q86YR5 675 aa4.25□□□□□ -1.73
HMGN1-218ENST00000490032 FBXL14Q8N1E6 418 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms