RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 HNRNPA1L2Q32P51 320 aaKnown RBP16.47■□□□□ 0.23
PLOD3-216ENST00000489927 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 USP30Q70CQ3 517 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
PLOD3-216ENST00000489927 GALNT15Q8N3T1 639 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 HJURPQ8NCD3 748 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-216ENST00000489927 GANCQ8TET4 914 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 MRGPRX3Q96LB0 322 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 SLC6A18Q96N87 628 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 FBXL12Q9NXK8 326 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 DKK4Q9UBT3 224 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 INTS6Q9UL03 887 aaKnown RBP16.47■□□□□ 0.23
PLOD3-216ENST00000489927 SCML1Q9UN30 329 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 PCDHB4Q9Y5E5 795 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
PLOD3-216ENST00000489927 TRABD2BA6NFA1 517 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 FYNP06241 537 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 GALCP54803 685 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 C21orf59P57076 290 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 CYP4F3Q08477 520 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 CAMK2BQ13554 666 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 SMAD1Q15797 465 aaKnown RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 CNGA2Q16280 664 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 SOWAHCQ53LP3 525 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 FSCBQ5H9T9 825 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 NCEH1Q6PIU2 408 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 MMS22LQ6ZRQ5 1243 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 PPM1KQ8N3J5 372 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 CARNMT1Q8N4J0 409 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 DQX1Q8TE96 717 aaKnown RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 KAT5Q92993 513 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 FCRL2Q96LA5 508 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 HSFY1Q96LI6 401 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 NT5C1BQ96P26 610 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 GSDMAQ96QA5 445 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 ACE2Q9BYF1 805 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 MIS12Q9H081 205 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
PLOD3-216ENST00000489927 EBF2Q9HAK2 575 aa16.46■□□□□ 0.23
PLOD3-216ENST00000489927 IGSF10Q6WRI0 2623 aa16.46■□□□□ 0.22
PLOD3-216ENST00000489927 A0A1W2PP55 124 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 VILLO15195 856 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 MID1O15344 667 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 PAPSS1O43252 624 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 RNASEH1O60930 286 aaKnown RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 FBXO21O94952 628 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 ASLP04424 464 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 CTSOP43234 321 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 CDH18Q13634 790 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 ARID5BQ14865 1188 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 STILQ15468 1287 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 CST6Q15828 149 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 MS4A13Q5J8X5 152 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 PRAMEF14Q5SWL7 426 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 C9orf64Q5T6V5 341 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 DHRS13Q6UX07 377 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 MMAAQ8IVH4 418 aaKnown RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 DDX50Q9BQ39 737 aaKnown RBP16.45■□□□□ 0.22
PLOD3-216ENST00000489927 NEUROG2Q9H2A3 272 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 FTSJ1Q9UET6 329 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 ERVW-1Q9UQF0 538 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 NAALADL1Q9UQQ1 740 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 TLR6Q9Y2C9 796 aa16.45■□□□□ 0.22
PLOD3-216ENST00000489927 FASNP49327 2511 aaKnown RBP16.44■□□□□ 0.22
PLOD3-216ENST00000489927 A0A1B0GTQ1 180 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 TTC34A8MYJ7 566 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 DFNA5O60443 496 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 RNASEH2AO75792 299 aaKnown RBP16.44■□□□□ 0.22
PLOD3-216ENST00000489927 WNT1P04628 370 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 KCNJ12Q14500 433 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 INAVAQ3KP66 663 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 DCAF6Q58WW2 860 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 PITRM1Q5JRX3 1037 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 GATAD2AQ86YP4 633 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 KDM1BQ8NB78 822 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 LMO3Q8TAP4 145 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 ADAM32Q8TC27 787 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 SLC39A13Q96H72 371 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 LRIG1Q96JA1 1093 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 SERPINB11Q96P15 392 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
PLOD3-216ENST00000489927 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 APC2O95996 2303 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 KNL1Q8NG31 2342 aa16.44■□□□□ 0.22
PLOD3-216ENST00000489927 LRRC72A6NJI9 287 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 C10orf142B7Z368 130 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 PMM2O15305 246 aa16.43■□□□□ 0.22
PLOD3-216ENST00000489927 LUC7L3O95232 432 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms