RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 NEUROG2Q9H2A3 272 aa17.63■□□□□ 0.41
TOP3B-217ENST00000489581 EBF2Q9HAK2 575 aa17.63■□□□□ 0.41
TOP3B-217ENST00000489581 INTS6Q9UL03 887 aaKnown RBP17.63■□□□□ 0.41
TOP3B-217ENST00000489581 COL5A1P20908 1838 aaPredicted RBP17.63■□□□□ 0.41
TOP3B-217ENST00000489581 O00370 1275 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 MID1O15344 667 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 ACSL4O60488 711 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 VDRP11473 427 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 CSKP41240 450 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 LRMPQ12912 555 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 PKDCCQ504Y2 493 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 KRBA2Q6ZNG9 492 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 SCML4Q8N228 414 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 FIBINQ8TAL6 211 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 TTC17Q96AE7 1141 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 MYEOVQ96EZ4 313 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 LMLNQ96KR4 655 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 ELF4Q99607 663 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-217ENST00000489581 AASDHPPTQ9NRN7 309 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 SCML1Q9UN30 329 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 COQ4Q9Y3A0 265 aa17.62■□□□□ 0.41
TOP3B-217ENST00000489581 NYNRINQ9P2P1 1898 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 FAM237AA0A1B0GTK4 181 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 ENC1O14682 589 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 IRAK2O43187 625 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 RNASEH1O60930 286 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 LDOC1O95751 146 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 IGLV3-27P01718 113 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 ITGAVP06756 1048 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 JUPP14923 745 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 ABCB4P21439 1286 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 TBX4P57082 545 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 YWHAEP62258 255 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 RPS24P62847 133 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 DNAJC3Q13217 504 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 CST6Q15828 149 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 HNRNPA1L2Q32P51 320 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 NUGGCQ68CJ6 796 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 NADSYN1Q6IA69 706 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 MMS22LQ6ZRQ5 1243 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 MMAAQ8IVH4 418 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 CARNMT1Q8N4J0 409 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 PIP4K2CQ8TBX8 421 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 CLEC4CQ8WTT0 213 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 TFAP2BQ92481 460 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 SKA1Q96BD8 255 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 CNDP2Q96KP4 475 aaKnown RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 MRGPRX3Q96LB0 322 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 PRICKLE1Q96MT3 831 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-217ENST00000489581 OMDQ99983 421 aa17.61■□□□□ 0.41
TOP3B-217ENST00000489581 TDRD6O60522 2096 aaKnown RBP17.6■□□□□ 0.41
TOP3B-217ENST00000489581 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 E9PAM4 449 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 WNT9AO14904 365 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 RNASEH2AO75792 299 aaKnown RBP17.6■□□□□ 0.41
TOP3B-217ENST00000489581 LTFP02788 710 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 ASLP04424 464 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 CD38P28907 300 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 ABCG1P45844 678 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 KCNJ12Q14500 433 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 SHBQ15464 509 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 C9orf64Q5T6V5 341 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 UBR7Q8N806 425 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 ZNF557Q8N988 423 aaPredicted RBP17.6■□□□□ 0.41
TOP3B-217ENST00000489581 HJURPQ8NCD3 748 aaPredicted RBP17.6■□□□□ 0.41
TOP3B-217ENST00000489581 OR2T34Q8NGX1 318 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 IRX2Q9BZI1 471 aaPredicted RBP17.6■□□□□ 0.41
TOP3B-217ENST00000489581 GOLPH3LQ9H4A5 285 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 PCDHGA1Q9Y5H4 931 aa17.6■□□□□ 0.41
TOP3B-217ENST00000489581 HELZ2Q9BYK8 2649 aaKnown RBP17.59■□□□□ 0.41
TOP3B-217ENST00000489581 TTC34A8MYJ7 566 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 ZNF202O95125 648 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 ITPKBP27987 946 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 SLC8A1P32418 973 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 CTSOP43234 321 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-217ENST00000489581 KRT85P78386 507 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 SFSWAPQ12872 951 aaKnown RBP17.59■□□□□ 0.41
TOP3B-217ENST00000489581 FSCBQ5H9T9 825 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 TMEM270Q6UE05 265 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 CFAP52Q8N1V2 620 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 EID2Q8N6I1 236 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 SAP25Q8TEE9 199 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 AZIN2Q96A70 460 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 NUCKS1Q9H1E3 243 aaKnown RBP17.59■□□□□ 0.41
TOP3B-217ENST00000489581 ERVW-1Q9UQF0 538 aa17.59■□□□□ 0.41
TOP3B-217ENST00000489581 A0A1W2PR77 199 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 TYW5A2RUC4 315 aaKnown RBP17.58■□□□□ 0.4
TOP3B-217ENST00000489581 M0QYV0 167 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 RFPL3O75679 317 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 ZIC2O95409 532 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-217ENST00000489581 CALCAP01258 141 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 PRB1P04280 392 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 HNF1BP35680 557 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms