RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ADAMTS19Q8TE59 1207 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 OLFM3Q96PB7 478 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 ERP44Q9BS26 406 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 TMEM121Q9BTD3 319 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 TASP1Q9H6P5 420 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 GDF3Q9NR23 364 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 WASH4PA8MWX3 477 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 F5H5T6 163 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 HYAL1Q12794 435 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 LRIT3Q3SXY7 679 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 FAM133BQ5BKY9 247 aaKnown RBP21.5■■□□□ 1.03
SND1-214ENST00000489417 TMC5Q6UXY8 1006 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 NPWQ8N729 165 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 RTL3Q8N8U3 475 aaKnown RBP21.5■■□□□ 1.03
SND1-214ENST00000489417 CASKIN2Q8WXE0 1202 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 RSAD2Q8WXG1 361 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 QKIQ96PU8 341 aaKnown RBP eCLIP21.5■■□□□ 1.03
SND1-214ENST00000489417 ZYG11BQ9C0D3 744 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 C10orf88Q9H8K7 445 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 AGO1Q9UL18 857 aaKnown RBP21.5■■□□□ 1.03
SND1-214ENST00000489417 NEU2Q9Y3R4 380 aa21.5■■□□□ 1.03
SND1-214ENST00000489417 TNRC18O15417 2968 aaPredicted RBP21.5■■□□□ 1.03
SND1-214ENST00000489417 A0A1W2PPC1 479 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 ESYT3A0FGR9 886 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 CFAP69A5D8W1 941 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 DRGXA6NNA5 263 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 HACD1B0YJ81 288 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 SGK1O00141 431 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 KRT14P02533 472 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 RHOQP17081 205 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 SLC6A4P31645 630 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 PDK1Q15118 436 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 DUPD1Q68J44 220 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 LGI2Q8N0V4 545 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 EFHBQ8N7U6 833 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 SEC14L1Q92503 715 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 IGSF8Q969P0 613 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 RPRD1AQ96P16 312 aaPredicted RBP21.49■■□□□ 1.03
SND1-214ENST00000489417 DDX50Q9BQ39 737 aaKnown RBP21.49■■□□□ 1.03
SND1-214ENST00000489417 TRIM31Q9BZY9 425 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 DPH5Q9H2P9 285 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 MPP6Q9NZW5 540 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 ZMYM5Q9UJ78 669 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 LSM7Q9UK45 103 aaKnown RBP21.49■■□□□ 1.03
SND1-214ENST00000489417 ARHGAP26Q9UNA1 814 aa21.49■■□□□ 1.03
SND1-214ENST00000489417 MYO7AQ13402 2215 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 BCLAF3A2AJT9 711 aaKnown RBP21.48■■□□□ 1.03
SND1-214ENST00000489417 GLP2RO95838 553 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 TNFRSF8P28908 595 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 IRAK1P51617 712 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 ZXDBP98169 803 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 TRIP13Q15645 432 aaPredicted RBP21.48■■□□□ 1.03
SND1-214ENST00000489417 C5orf22Q49AR2 442 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 SLC45A4Q5BKX6 768 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 RARS2Q5T160 578 aaKnown RBP21.48■■□□□ 1.03
SND1-214ENST00000489417 TMEM184AQ6ZMB5 413 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 B4GALNT4Q76KP1 1039 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 NLRP14Q86W24 1093 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 CMTM8Q8IZV2 173 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 CCDC33Q8N5R6 958 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 LZTR1Q8N653 840 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 NETO2Q8NC67 525 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 KLC2Q9H0B6 622 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 FAM114A2Q9NRY5 505 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 LMCD1Q9NZU5 365 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 CFAP97Q9P2B7 532 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 ASIC3Q9UHC3 531 aa21.48■■□□□ 1.03
SND1-214ENST00000489417 MRPS23Q9Y3D9 190 aaKnown RBP21.48■■□□□ 1.03
SND1-214ENST00000489417 PPP1R12AO14974 1030 aaPredicted RBP21.47■■□□□ 1.03
SND1-214ENST00000489417 GREM1O60565 184 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 CEBPBP17676 345 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 STIP1P31948 543 aaKnown RBP21.47■■□□□ 1.03
SND1-214ENST00000489417 AVPR1AP37288 418 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 ADGRF1Q5T601 910 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 RFWD3Q6PCD5 774 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 CCNI2Q6ZMN8 369 aaPredicted RBP21.47■■□□□ 1.03
SND1-214ENST00000489417 Q6ZNB5 142 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 DDX42Q86XP3 938 aaKnown RBP eCLIP21.47■■□□□ 1.03
SND1-214ENST00000489417 FAM71DQ8N9W8 422 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 CCHCR1Q8TD31 782 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 TFB1MQ8WVM0 346 aaKnown RBP21.47■■□□□ 1.03
SND1-214ENST00000489417 MYEOVQ96EZ4 313 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 PCDH9Q9HC56 1237 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 TMEM248Q9NWD8 314 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 DONSONQ9NYP3 566 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 STOML2Q9UJZ1 356 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 SNX24Q9Y343 169 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 SH3BP1Q9Y3L3 701 aa21.47■■□□□ 1.03
SND1-214ENST00000489417 LEFTY2O00292 366 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 NCAM2O15394 837 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 LINC01565O15544 149 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 CNTN5O94779 1100 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 IFNB1P01574 187 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 MX2P20592 715 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 RBL1P28749 1068 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 DRG2P55039 364 aaKnown RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 GDF10P55107 478 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 MLLT1Q03111 559 aaPredicted RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 GALNT2Q10471 571 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 CUL1Q13616 776 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms