RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 EPHX1P07099 455 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 DLDP09622 509 aaKnown RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 GABRG2P18507 467 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 CD70P32970 193 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 KLHL30Q0D2K2 578 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 LMAN2Q12907 356 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 SLC12A1Q13621 1099 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 AUHQ13825 339 aaKnown RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 ARL13BQ3SXY8 428 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 PLK5Q496M5 336 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 FIGNQ5HY92 759 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 TMEM215Q68D42 235 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 RNF43Q68DV7 783 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 ACAD10Q6JQN1 1059 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 KIAA1324Q6UXG2 1013 aaKnown RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 KIAA0907Q7Z7F0 614 aaPredicted RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 ADIPOR2Q86V24 386 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 KIAA2013Q8IYS2 634 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 CYB5D2Q8WUJ1 264 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 RXFP2Q8WXD0 754 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 SORCS1Q8WY21 1168 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 CFAP57Q96MR6 1250 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 PRMT1Q99873 361 aaKnown RBP14.75□□□□□ -0.05
BRCA1-218ENST00000489037 ARHGEF38Q9NXL2 777 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 AIPL1Q9NZN9 384 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 SUN2Q9UH99 717 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 VANGL2Q9ULK5 521 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 HS3ST4Q9Y661 456 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 VPS13AQ96RL7 3174 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 MYO15AQ9UKN7 3530 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 DCLK1O15075 740 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 CBFA2T2O43439 604 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 FOXD2O60548 495 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ADCY5O95622 1261 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 NNMTP40261 264 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 P2RY2P41231 377 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 GSCP56915 257 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ATP11AP98196 1134 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 SPEM2Q0P670 501 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ZNF177Q13360 481 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ENPP2Q13822 863 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 RNF219Q5W0B1 726 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 KIAA1211LQ6NV74 962 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 FBXL22Q6P050 247 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 LRSAM1Q6UWE0 723 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 SLC36A4Q6YBV0 504 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 LPCAT2Q7L5N7 544 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 EMC1Q8N766 993 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 C3orf20Q8ND61 904 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 WFDC5Q8TCV5 224 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 RLN3Q8WXF3 142 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 TTC17Q96AE7 1141 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 ERLEC1Q96DZ1 483 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 MYEOVQ96EZ4 313 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 VCPIP1Q96JH7 1222 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 DUSP15Q9H1R2 295 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-218ENST00000489037 HAUS4Q9H6D7 363 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 PRDM16Q9HAZ2 1276 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 IFNKQ9P0W0 207 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 CALCOCO1Q9P1Z2 691 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 PCDHGA5Q9Y5G8 931 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 DOCK4Q8N1I0 1966 aa14.74□□□□□ -0.05
BRCA1-218ENST00000489037 SIGLEC16A6NMB1 481 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 CLDN11O75508 207 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 EPN2O95208 641 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 ACADMP11310 421 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 NDUFV2P19404 249 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 TFE3P19532 575 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-218ENST00000489037 GPD1P21695 349 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 CSKP41240 450 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 SULT2A1Q06520 285 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 PTP4A2Q12974 167 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 NFKBIBQ15653 356 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 CDO1Q16878 200 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 FUT11Q495W5 492 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 FSCBQ5H9T9 825 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 PITRM1Q5JRX3 1037 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 OTUD1Q5VV17 481 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-218ENST00000489037 DCUN1D2Q6PH85 259 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 VPS36Q86VN1 386 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 PRCCQ92733 491 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-218ENST00000489037 C1orf74Q96LT6 269 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 HAPLN3Q96S86 360 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 FBRSQ9HAH7 460 aa14.73□□□□□ -0.05
BRCA1-218ENST00000489037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.73□□□□□ -0.057e-6■■□□□ 12.1
BRCA1-218ENST00000489037 BZW2Q9Y6E2 419 aaKnown RBP14.73□□□□□ -0.05
BRCA1-218ENST00000489037 PI4KAP42356 2102 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 A0A1W2PQJ5 194 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 TMCO5BA8MYB1 307 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 AP5Z1O43299 807 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 NDUFS2O75306 463 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 ENDOD1O94919 500 aa14.72□□□□□ -0.05
BRCA1-218ENST00000489037 SRPRAP08240 638 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms