RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
CHD1L-208ENST00000488864 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
CHD1L-208ENST00000488864 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
CHD1L-208ENST00000488864 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.21
CHD1L-208ENST00000488864 TCRBV5S1A1TA0A578 114 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 ANKRD33BA6NCL7 494 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 KRT3P12035 628 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 ETS1P14921 441 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 DNAJB1P25685 340 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 RFC1P35251 1148 aaPredicted RBP13.71□□□□□ -0.22
CHD1L-208ENST00000488864 TKTL1P51854 596 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 ERVFC1P60507 584 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 KLC1Q07866 573 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 CCNG2Q16589 344 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 MUM1Q2TAK8 710 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 BBOF1Q8ND07 529 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 PHC3Q8NDX5 983 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.22
CHD1L-208ENST00000488864 CFAP57Q96MR6 1250 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 SMC6Q96SB8 1091 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 MAK16Q9BXY0 300 aaKnown RBP13.71□□□□□ -0.22
CHD1L-208ENST00000488864 PBX4Q9BYU1 374 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 DLGAP2Q9P1A6 1054 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.71□□□□□ -0.22
CHD1L-208ENST00000488864 REV3LO60673 3130 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 TRANK1O15050 2925 aa13.71□□□□□ -0.22
CHD1L-208ENST00000488864 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 HHLA1C9JL84 531 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 NVLO15381 856 aaKnown RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 SPATA31D3P0C874 917 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 GJC1P36383 396 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 TSNAXIP1Q2TAA8 658 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 CWF19L1Q69YN2 538 aaKnown RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 OLFML1Q6UWY5 402 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 SPATA31D4Q6ZUB0 917 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 EGFL6Q8IUX8 553 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 FEZF2Q8TBJ5 459 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 RNF217Q8TC41 542 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 HSFY1Q96LI6 401 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 CSNK1G1Q9HCP0 422 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 DCTN4Q9UJW0 460 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 SCINQ9Y6U3 715 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 TEX28O15482 410 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 TYROBPO43914 113 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 CXCL14O95715 111 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 RASSF2P50749 326 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 OGDHQ02218 1023 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 OVGP1Q12889 678 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 LVRNQ6Q4G3 990 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 SIX6OS1Q8N1H7 587 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 FAM149B1Q96BN6 582 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 MCRS1Q96EZ8 462 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 ULBP1Q9BZM6 244 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
CHD1L-208ENST00000488864 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
CHD1L-208ENST00000488864 GBF1Q92538 1859 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 PLXNA4Q9HCM2 1894 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 KLHL33A6NCF5 533 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 GRM6O15303 877 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 PIAS1O75925 651 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 KRT36O76013 467 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
CHD1L-208ENST00000488864 CTSAP10619 480 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 TAP1Q03518 808 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 NR1H3Q13133 447 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 SLC45A4Q5BKX6 768 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 OR52E8Q6IFG1 317 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 TDRPQ86YL5 185 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 SPPL3Q8TCT6 385 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 PRR11Q96HE9 360 aaPredicted RBP13.69□□□□□ -0.22
CHD1L-208ENST00000488864 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHD1L-208ENST00000488864 OSBPL8Q9BZF1 889 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 VPS37BQ9H9H4 285 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 ARL8BQ9NVJ2 186 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 KLHL11Q9NVR0 708 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 LNPEPQ9UIQ6 1025 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 TMEM191CA6NGB0 347 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 BANF1O75531 89 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 IRS1P35568 1242 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 SLC1A1P43005 524 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 ACADSBP45954 432 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 SLC5A3P53794 718 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms