RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 GDI1P31150 447 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 GBP1P32455 592 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 DEUP1Q05D60 604 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 TDGQ13569 410 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 TRIM68Q6AZZ1 485 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 DENND1CQ8IV53 801 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 FAM172AQ8WUF8 416 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 OSCP1Q8WVF1 389 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 BTBD6Q96KE9 485 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 RUNDC3BQ96NL0 473 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 FAM83CQ9BQN1 747 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 CNPY3Q9BT09 278 aa20.02■□□□□ 0.79
CCM2-216ENST00000488727 LSM7Q9UK45 103 aaKnown RBP20.02■□□□□ 0.79
CCM2-216ENST00000488727 AGO1Q9UL18 857 aaKnown RBP20.02■□□□□ 0.79
CCM2-216ENST00000488727 MUC3AQ02505 3323 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 ARNTLO00327 626 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 DAPK3O43293 454 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 SLC34A2O95436 690 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 CXCR3P49682 368 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 DRG2P55039 364 aaKnown RBP20.01■□□□□ 0.79
CCM2-216ENST00000488727 HDAC4P56524 1084 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 DR1Q01658 176 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 CYP1B1Q16678 543 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 TTMPQ5BVD1 217 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 YAF2Q8IY57 180 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 UHRF1Q96T88 793 aaPredicted RBP20.01■□□□□ 0.79
CCM2-216ENST00000488727 NEUROG2Q9H2A3 272 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 ANLNQ9NQW6 1124 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 THG1LQ9NWX6 298 aaKnown RBP20.01■□□□□ 0.79
CCM2-216ENST00000488727 PCYOX1Q9UHG3 505 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 XPO7Q9UIA9 1087 aaKnown RBP20.01■□□□□ 0.79
CCM2-216ENST00000488727 ANAPC7Q9UJX3 599 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 COL4A3Q01955 1670 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 TRIOO75962 3097 aa20.01■□□□□ 0.79
CCM2-216ENST00000488727 MYOFQ9NZM1 2061 aa20■□□□□ 0.79
CCM2-216ENST00000488727 I6L893 689 aaPredicted RBP20■□□□□ 0.79
CCM2-216ENST00000488727 CHADO15335 359 aa20■□□□□ 0.79
CCM2-216ENST00000488727 SHOX2O60902 331 aaPredicted RBP20■□□□□ 0.79
CCM2-216ENST00000488727 PSMA2P25787 234 aa20■□□□□ 0.79
CCM2-216ENST00000488727 RDXP35241 583 aaKnown RBP20■□□□□ 0.79
CCM2-216ENST00000488727 HARS2P49590 506 aaKnown RBP20■□□□□ 0.79
CCM2-216ENST00000488727 RWDD2BP57060 319 aa20■□□□□ 0.79
CCM2-216ENST00000488727 SPDYCQ5MJ68 293 aa20■□□□□ 0.79
CCM2-216ENST00000488727 NUGGCQ68CJ6 796 aa20■□□□□ 0.79
CCM2-216ENST00000488727 DUPD1Q68J44 220 aa20■□□□□ 0.79
CCM2-216ENST00000488727 STRADAQ7RTN6 431 aa20■□□□□ 0.79
CCM2-216ENST00000488727 KIAA1958Q8N8K9 716 aa20■□□□□ 0.79
CCM2-216ENST00000488727 PRELID2Q8N945 189 aa20■□□□□ 0.79
CCM2-216ENST00000488727 DUS2Q9NX74 493 aaKnown RBP20■□□□□ 0.79
CCM2-216ENST00000488727 SORCS3Q9UPU3 1222 aa20■□□□□ 0.79
CCM2-216ENST00000488727 KCNU1A8MYU2 1149 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 MOCS2O96007 188 aaPredicted RBP19.99■□□□□ 0.79
CCM2-216ENST00000488727 F9P00740 461 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 ARSAP15289 507 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 CCR1P32246 355 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 SLC1A1P43005 524 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 TNK2Q07912 1038 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 PPP2R5DQ14738 602 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 EML3Q32P44 896 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 LEKR1Q6ZMV7 388 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 FAM131BQ86XD5 332 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 SLC13A5Q86YT5 568 aaPredicted RBP19.99■□□□□ 0.79
CCM2-216ENST00000488727 UNC45BQ8IWX7 931 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 ARFGAP1Q8N6T3 406 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 C12orf50Q8NA57 414 aaPredicted RBP19.99■□□□□ 0.79
CCM2-216ENST00000488727 PKNOX2Q96KN3 472 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 ERP44Q9BS26 406 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 DCLK3Q9C098 648 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 EBF3Q9H4W6 596 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 BRD9Q9H8M2 597 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 HPS4Q9NQG7 708 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 TMPRSS4Q9NRS4 437 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 MUTYHQ9UIF7 546 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 NCOR1O75376 2440 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 PYGMP11217 842 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 PTGIRP43119 386 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 DAB2IPQ5VWQ8 1189 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 JAMLQ86YT9 394 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 RNF34Q969K3 372 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 ARL8AQ96BM9 186 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 WDCPQ9H6R7 721 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 TBC1D14Q9P2M4 693 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 DUSP12Q9UNI6 340 aa19.99■□□□□ 0.79
CCM2-216ENST00000488727 OTOL1A6NHN0 477 aaPredicted RBP19.98■□□□□ 0.79
CCM2-216ENST00000488727 APOEP02649 317 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 SLC2A3P11169 496 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 SRFP11831 508 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 HSD17B3P37058 310 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 IFNAR2P48551 515 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 SKOR1P84550 965 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 NADSYN1Q6IA69 706 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 AADACL2Q6P093 401 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 ADGRG2Q8IZP9 1017 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 TRIM51Q9BSJ1 452 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 ARHGEF38Q9NXL2 777 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 GTSE1Q9NYZ3 720 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 STOML2Q9UJZ1 356 aa19.98■□□□□ 0.79
CCM2-216ENST00000488727 MYO1FO00160 1098 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 SLC9A3R1O14745 358 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms