RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DEUP1Q05D60 604 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 CCDC14Q49A88 953 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 RAB6CQ53S08 254 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 BRMS1LQ5PSV4 323 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 ZNF683Q8IZ20 524 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 JOSD2Q8TAC2 188 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 MYO19Q96H55 970 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 MKRN2Q9H000 416 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 RAB6CQ9H0N0 254 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 SLC6A17Q9H1V8 727 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 TMPRSS4Q9NRS4 437 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 TMEM51Q9NW97 253 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 MBD1Q9UIS9 605 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 WDR87Q6ZQQ6 2873 aa16.48■□□□□ 0.23
CTDSP1-209ENST00000488627 TYW5A2RUC4 315 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 C7P10643 843 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 GGCXP38435 758 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 PRKCIP41743 596 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 UBASH3AP57075 661 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 TPM4P67936 248 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 E2F5Q15329 346 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 PMS2CLQ68D20 193 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 CIR1Q86X95 450 aaPredicted RBP16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 CCAR2Q8N163 923 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 RXFP2Q8WXD0 754 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 C1orf74Q96LT6 269 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 TAS2R14Q9NYV8 317 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 PLA2G4CQ9UP65 541 aa16.47■□□□□ 0.23
CTDSP1-209ENST00000488627 ZNF292O60281 2723 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 A0A1B0GVM2 712 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 TCAF2A6NFQ2 919 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 H0Y626 953 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 LRP3O75074 770 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 EPN2O95208 641 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CALB1P05937 261 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 ATP5BP06576 529 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 HLA-EP13747 358 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 POLR2EP19388 210 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 RFC1P35251 1148 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CSKP41240 450 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 COPAP53621 1224 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 SPEM2Q0P670 501 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CAMK2GQ13555 558 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CDH18Q13634 790 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 PITRM1Q5JRX3 1037 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CXorf57Q6NSI4 855 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 SERPINA13PQ6UXR4 307 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 C11orf74Q86VG3 221 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 MCOLN2Q8IZK6 566 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 APCDD1Q8J025 514 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 C3orf20Q8ND61 904 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 OR52K2Q8NGK3 314 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 CENPIQ92674 756 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 ALG14Q96F25 216 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 SIK2Q9H0K1 926 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 VANGL2Q9ULK5 521 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 SNX10Q9Y5X0 201 aa16.46■□□□□ 0.23
CTDSP1-209ENST00000488627 A0A1W2PQJ5 194 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 SIGLEC16A6NMB1 481 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 DRGXA6NNA5 263 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 RHOBTB1O94844 696 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 EPHX1P07099 455 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 KRT3P12035 628 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 CTSOP43234 321 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PTPN9P43378 593 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PLK1P53350 603 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 ATP11AP98196 1134 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 STARD3Q14849 445 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 NFKBIBQ15653 356 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 ELF2Q15723 593 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 ASIC2Q16515 512 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 C15orf59Q2T9L4 293 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PLEKHG6Q3KR16 790 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PLA2G2CQ5R387 149 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 SFMBT2Q5VUG0 894 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 WDR59Q6PJI9 974 aa16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTDSP1-209ENST00000488627 METTL3Q86U44 580 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms