RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CHAF1AQ13111 956 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-214ENST00000488427 RFX8Q6ZV50 586 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 CCDC117Q8IWD4 279 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-214ENST00000488427 CPT1BQ92523 772 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 MAP4K1Q92918 833 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 KAZALD1Q96I82 304 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 RMDN3Q96TC7 470 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 SH2D3AQ9BRG2 576 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 CRB3Q9BUF7 120 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 HTATIP2Q9BUP3 242 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 CCDC134Q9H6E4 229 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 EPS8L2Q9H6S3 715 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 LIN7CQ9NUP9 197 aaKnown RBP4.91□□□□□ -1.62
ITGB1-214ENST00000488427 SLC8A2Q9UPR5 921 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 GOLGA3Q08378 1498 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 UNC13BO14795 1591 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 SCAF11Q99590 1463 aaKnown RBP4.9□□□□□ -1.62
ITGB1-214ENST00000488427 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 FCHO1O14526 889 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TAF5LO75529 589 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 CSTBP04080 98 aaKnown RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 AKR1A1P14550 325 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 ATP5F1P24539 256 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 THBS4P35443 961 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 MCM2P49736 904 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 CDK7P50613 346 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 STIM1Q13586 685 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 FHL3Q13643 280 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 DAZAP2Q15038 168 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 PFKFB4Q16877 469 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 MSANTD2Q6P1R3 559 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 NFRKBQ6P4R8 1299 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 DEF8Q6ZN54 512 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 LAS2Q8IYD9 372 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 SLC22A17Q8WUG5 538 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 RPS6KC1Q96S38 1066 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TMEM79Q9BSE2 394 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 RTKNQ9BST9 563 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 PAGR1Q9BTK6 254 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 KATNAL1Q9BW62 490 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 TMEM120AQ9BXJ8 343 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 SFXN1Q9H9B4 322 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 AS3MTQ9HBK9 375 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 OBP2BQ9NPH6 170 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 PDGFCQ9NRA1 345 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 DACT1Q9NYF0 836 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 LRFN1Q9P244 771 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF70Q9UC06 446 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 BAG5Q9UL15 447 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 AHDC1Q5TGY3 1603 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-214ENST00000488427 CARMIL1Q5VZK9 1371 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 NINLQ9Y2I6 1382 aa4.9□□□□□ -1.63
ITGB1-214ENST00000488427 RTEL1-TNFRSF6BF6WH68 1400 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ATP7AQ04656 1500 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 MBD3L5A6NJ08 208 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-214ENST00000488427 CGB1A6NKQ9 187 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 E5RJQ4 531 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 F8W810 466 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 DHHO43323 396 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 CER1O95813 267 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 PLAUP00749 431 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ALADP13716 330 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 TGM2P21980 687 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 RPS6KB1P23443 525 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 SERPINB3P29508 390 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 GRK5P34947 590 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 IL6STP40189 918 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-214ENST00000488427 CPA2P48052 419 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 PCP4P48539 62 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 MTA1Q13330 715 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 AAK1Q2M2I8 961 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ANXA2RQ3ZCQ2 193 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 CCDC38Q502W7 563 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ANKRD40Q6AI12 368 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 GGT6Q6P531 493 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 RBM44Q6ZP01 1051 aaKnown RBP4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ANKRD13BQ86YJ7 626 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 POF1BQ8WVV4 589 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 TRIM63Q969Q1 353 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 C18orf8Q96DM3 657 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 TUBB6Q9BUF5 446 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 QTRT1Q9BXR0 403 aaKnown RBP4.89□□□□□ -1.63
ITGB1-214ENST00000488427 BRD8Q9H0E9 1235 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 NDUFAF4Q9P032 175 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms