RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 BMPR2Q13873 1038 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 FASTKD1Q53R41 847 aaKnown RBP14.58□□□□□ -0.07
RER1-207ENST00000488353 CELF3Q5SZQ8 465 aaKnown RBP14.58□□□□□ -0.07
RER1-207ENST00000488353 AMIGO2Q86SJ2 522 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 TRIML2Q8N7C3 387 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 RIN3Q8TB24 985 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 SERPINI1Q99574 410 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 TRIM56Q9BRZ2 755 aaKnown RBP14.58□□□□□ -0.07
RER1-207ENST00000488353 ZNF408Q9H9D4 720 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 BCAP29Q9UHQ4 241 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 PCDHGC3Q9UN70 934 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 LRRC37A2A6NM11 1700 aa14.58□□□□□ -0.07
RER1-207ENST00000488353 MCF2LO15068 1137 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 AVILO75366 819 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 THRAP10827 490 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 NCF2P19878 526 aaPredicted RBP14.58□□□□□ -0.08
RER1-207ENST00000488353 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.08
RER1-207ENST00000488353 AP3M2P53677 418 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 YWHAEP62258 255 aaKnown RBP14.58□□□□□ -0.08
RER1-207ENST00000488353 LAMTOR4Q0VGL1 99 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 KCNJ11Q14654 390 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 RAB6CQ53S08 254 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 C6orf52Q5T4I8 152 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 TEDDM1Q5T9Z0 273 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 MBLAC2Q68D91 279 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 GRAMD4Q6IC98 578 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 ZPBP2Q6X784 338 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 TSPAN14Q8NG11 270 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 PPP4R1Q8TF05 950 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 VPS50Q96JG6 964 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 RTKNQ9BST9 563 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 YIPF2Q9BWQ6 316 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 FRMD8Q9BZ67 464 aaPredicted RBP14.58□□□□□ -0.08
RER1-207ENST00000488353 RAB6CQ9H0N0 254 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 ZC3H7BQ9UGR2 993 aaKnown RBP14.58□□□□□ -0.08
RER1-207ENST00000488353 ITGB1BP2Q9UKP3 347 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
RER1-207ENST00000488353 DNAJC25-GNG10A0A024R161 153 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 CHADO15335 359 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 B4GALT5O43286 388 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 LYPLA1O75608 230 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 ERBB2P04626 1255 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 HOXC6P09630 235 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 COX4I1P13073 169 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 MIPP30301 263 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 CDH5P33151 784 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 OXCT1P55809 520 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 NUP107P57740 925 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 PDAP1Q13442 181 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 SPIDRQ14159 915 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 STXBP5Q5T5C0 1151 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 SH3PXD2AQ5TCZ1 1133 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 TMEM192Q8IY95 271 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 CCT7Q99832 543 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 OSBPL6Q9BZF3 934 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 INO80BQ9C086 356 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 XYLT2Q9H1B5 865 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 RIMS3Q9UJD0 308 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 SQORQ9Y6N5 450 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 APOC4-APOC2K7ER74 178 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 APOC2P02655 101 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 OSBPP22059 807 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 GABRB2P47870 512 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 PSMD7P51665 324 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 TAZQ16635 292 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 PDCD4Q53EL6 469 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 FSCBQ5H9T9 825 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 DARS2Q6PI48 645 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 USP50Q70EL3 339 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 LPCAT2Q7L5N7 544 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 ADGRF2Q8IZF7 708 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 SPATA18Q8TC71 538 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 TRPC4APQ8TEL6 797 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 LRRN4Q8WUT4 740 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 PFDN4Q9NQP4 134 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 HMGXB4Q9UGU5 601 aa14.57□□□□□ -0.08
RER1-207ENST00000488353 PRPF19Q9UMS4 504 aaKnown RBP14.57□□□□□ -0.08
RER1-207ENST00000488353 EVPLQ92817 2033 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 E2F6O75461 281 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 TNNC2P02585 160 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 APOEP02649 317 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 PSMC3P17980 439 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 BTG3Q14201 252 aaPredicted RBP14.56□□□□□ -0.08
RER1-207ENST00000488353 MROH9Q5TGP6 573 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 FASTKD5Q7L8L6 764 aaKnown RBP14.56□□□□□ -0.08
RER1-207ENST00000488353 RSPH3Q86UC2 560 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 XYLT1Q86Y38 959 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 TWNKQ96RR1 684 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 SDCBP2Q9H190 292 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 INIPQ9NRY2 104 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 UGT1A9O60656 530 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 MAP3K6O95382 1288 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 FGF3P11487 239 aaPredicted RBP14.56□□□□□ -0.08
RER1-207ENST00000488353 SERPINB9P50453 376 aa14.56□□□□□ -0.08
RER1-207ENST00000488353 CLCN3P51790 818 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms