RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TK1P04183 234 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 LYL1P12980 280 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 SFPQP23246 707 aaKnown RBP eCLIP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 CNTFP26441 200 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 DUSP1P28562 367 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 GRK5P34947 590 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 MMP13P45452 471 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 RBM6P78332 1123 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 KPNB1Q14974 876 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 SMAD1Q15797 465 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF260Q3ZCT1 412 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF484Q5JVG2 852 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 FBXO47Q5MNV8 452 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 DENND2CQ68D51 928 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 DGAT2L7PQ6IED9 249 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 TMEM65Q6PI78 240 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 LVRNQ6Q4G3 990 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 SERPINA13PQ6UXR4 307 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 CYP26C1Q6V0L0 522 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF354CQ86Y25 554 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 NGDNQ8NEJ9 315 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 ADAMTS15Q8TE58 950 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 PNISRQ8TF01 805 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 ASB12Q8WXK4 309 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 CPT1BQ92523 772 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 FAR2Q96K12 515 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 HS6ST2Q96MM7 605 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 GPR78Q96P69 363 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 TMEM79Q9BSE2 394 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 GATA5Q9BWX5 397 aaPredicted RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 EBF3Q9H4W6 596 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 CHODLQ9H9P2 273 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 PLEKHA2Q9HB19 425 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 GAR1Q9NY12 217 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 NDUFAF4Q9P032 175 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 NFU1Q9UMS0 254 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 CACNA1IQ9P0X4 2223 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 IGKV2D-30A0A075B6S6 120 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3DA0A087WVF3 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3IA0A087WXS9 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3EA0A087X179 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3KA0A087X1G2 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3BA6NDS4 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3FA6NER0 549 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 RRN3P2A6NIE6 340 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 EFCAB8A8MWE9 144 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3LB9A6J9 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 STX16-NPEPL1H3BU86 382 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PPP6CO00743 305 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 STX16O14662 325 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 NCAM2O15394 837 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 GCATO75600 419 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PYGLP06737 847 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 POLBP06746 335 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CYP3A4P08684 503 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CSF1P09603 554 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3HP0C7X1 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CYP2A6P11509 494 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ACP5P13686 325 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 HSD3B1P14060 373 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 MATN1P21941 496 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PAX3P23760 479 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 IDUAP35475 653 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 NR4A2P43354 598 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CCT5P48643 541 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 VPS41P49754 854 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CDK7P50613 346 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF84P51523 738 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CCR5P51681 352 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 RCAN1P53805 252 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 SLC37A1P57057 533 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ACTR2P61160 394 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 SHC2P98077 582 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 DCTN1Q14203 1278 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF569Q5MCW4 686 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PXDC1Q5TGL8 231 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PRAMEF17Q5VTA0 474 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3GQ6DHY5 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3CQ6IPX1 549 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 SLC18B1Q6NT16 456 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF66Q6ZN08 573 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 LRRTM4Q86VH4 590 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ANKRD18AQ8IVF6 992 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 SMAP1Q8IYB5 467 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 LAS2Q8IYD9 372 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ADGRF3Q8IZF5 1079 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D3Q8IZP1 549 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 EXD3Q8N9H8 876 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PNLDC1Q8NA58 520 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 LINS1Q8NG48 757 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 CEP70Q8NHQ1 597 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 SLC2A12Q8TD20 617 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 HERVK_113Q902F9 699 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ZSCAN31Q96LW9 406 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 COG8Q96MW5 612 aa3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 EIF2AK1Q9BQI3 630 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 PYM1Q9BRP8 204 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 TLR8Q9NR97 1041 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-219ENST00000488035 ASNSD1Q9NWL6 643 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms