RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PRRG1O14668 218 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ALOX15BO15296 676 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 OPHN1O60890 802 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 METTL18O95568 372 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ACSL3O95573 720 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ABHD2P08910 425 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ATP2A2P16615 1042 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 SYN1P17600 705 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 MX2P20592 715 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 GARSP41250 739 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 MAGEA4P43358 317 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 KPNA1P52294 538 aaPredicted RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF33AQ06730 810 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 AP1B1Q10567 949 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 TWF1Q12792 350 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 SEMA5AQ13591 1074 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 FASTKD3Q14CZ7 662 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ANKRD20A2Q5SQ80 823 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ANKRD20A1Q5TYW2 823 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ANKRD20A3Q5VUR7 823 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 AFMIDQ63HM1 303 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 RWDD4Q6NW29 188 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 NLRP14Q86W24 1093 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6L1Q8N7Z2 621 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ATP6V0D2Q8N8Y2 350 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 PSMG2Q969U7 264 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 PKNOX2Q96KN3 472 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF512Q96ME7 567 aaPredicted RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 PRMT1Q99873 361 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 WDR83Q9BRX9 315 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 CATSPERBQ9H7T0 1116 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 SAYSD1Q9NPB0 183 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 PPARGC1AQ9UBK2 798 aaKnown RBP9.71□□□□□ -0.86
SF3B1-211ENST00000487698 LZTS1Q9Y250 596 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 IRAK3Q9Y616 596 aa9.71□□□□□ -0.86
SF3B1-211ENST00000487698 HELZP42694 1942 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ATG2AQ2TAZ0 1938 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA8MH3BSY2 632 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TLL1O43897 1013 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TPSB2P20231 275 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ATP5C1P36542 298 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 BMPR1AP36894 532 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ARL4CP56559 192 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 MTA1Q13330 715 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 PLD1Q13393 1074 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 AUHQ13825 339 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TPSAB1Q15661 275 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 FNBP1LQ5T0N5 605 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ACBD5Q5T8D3 534 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 FAXCQ5TGI0 409 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 LILRA6Q6PI73 481 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 CENPUQ71F23 418 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TMEM150AQ86TG1 271 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 LZTR1Q8N653 840 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 RTL3Q8N8U3 475 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 CCNYQ8ND76 341 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ZSCAN18Q8TBC5 510 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 EXOC4Q96A65 974 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 C9orf72Q96LT7 481 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ETNK1Q9HBU6 452 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TRPM5Q9NZQ8 1165 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 VPS18Q9P253 973 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 MTSS1O43312 755 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 COCHO43405 550 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TGM5O43548 720 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 MYZAPP0CAP1 466 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 PTPN3P26045 913 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ELF1P32519 619 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 PPP3CCP48454 512 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 EPHB3P54753 998 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 PDIA2Q13087 525 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 NADSYN1Q6IA69 706 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 PPP1R21Q6ZMI0 780 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF534Q76KX8 674 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 DNAJB7Q7Z6W7 309 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF567Q8N184 647 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 MCUQ8NE86 351 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 CELF6Q96J87 481 aaKnown RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ATP6V1G3Q96LB4 118 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 TSGA13Q96PP4 275 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 FERMT1Q9BQL6 677 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 FRMD8Q9BZ67 464 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 NDFIP2Q9NV92 336 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 IGSF9Q9P2J2 1179 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF212Q9UDV6 495 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 SLC12A6Q9UHW9 1150 aa9.7□□□□□ -0.86
SF3B1-211ENST00000487698 VANGL2Q9ULK5 521 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms