RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 EME2A4GXA9 379 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 K7ESM1 405 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 MDM4O15151 490 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 MID1O15344 667 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 MTSS1O43312 755 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 RTN2O75298 545 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 DLDP09622 509 aaKnown RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 ALPPL2P10696 532 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 UQCRFS1P47985 274 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 EHHADHQ08426 723 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 EIF3IQ13347 325 aaKnown RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 ZNF177Q13360 481 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 POSTNQ15063 836 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 IL17AQ16552 155 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 VASH2Q86V25 355 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 AADATQ8N5Z0 425 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 ZMIZ2Q8NF64 920 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 GANCQ8TET4 914 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 WFIKKN2Q8TEU8 576 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 MTG2Q9H4K7 406 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
TRIM56-204ENST00000487252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRIM56-204ENST00000487252 HIVEP3Q5T1R4 2406 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 A1L4Q6 167 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 CASC3O15234 703 aaKnown RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 SEMA7AO75326 666 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 RNASEH2AO75792 299 aaKnown RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 CYBBP04839 570 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 GOT1P17174 413 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 HOXD9P28356 352 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 UGT1A5P35504 534 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 KCNMA1Q12791 1236 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 TTC38Q5R3I4 469 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 GUSBP11Q6P575 273 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 TMEM145Q8NBT3 493 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 WDR48Q8TAF3 677 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 POMGNT1Q8WZA1 660 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 CSNK1G1Q9HCP0 422 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 SEPT10Q9P0V9 454 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 AGO1Q9UL18 857 aaKnown RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
TRIM56-204ENST00000487252 NYNRINQ9P2P1 1898 aaKnown RBP12.18□□□□□ -0.46
TRIM56-204ENST00000487252 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 NEMP2A6NFY4 417 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 STAT4Q14765 748 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 CDKN3Q16667 212 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 HNRNPA1L2Q32P51 320 aaKnown RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 CHST9Q7L1S5 443 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 EFL1Q7Z2Z2 1120 aaKnown RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 AHI1Q8N157 1196 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 KLHDC7BQ96G42 594 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 OMDQ99983 421 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 PDE11AQ9HCR9 933 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 RBAKQ9NYW8 714 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 SEL1LQ9UBV2 794 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
TRIM56-204ENST00000487252 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-204ENST00000487252 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 NTN3O00634 580 aaPredicted RBP12.16□□□□□ -0.46
TRIM56-204ENST00000487252 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
TRIM56-204ENST00000487252 SIN3BO75182 1162 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 PPP1R37O75864 691 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 BEST1O76090 585 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 CLDN1O95832 211 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 DDAH2O95865 285 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 PRKCGP05129 697 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 CORO1AP31146 461 aaKnown RBP12.16□□□□□ -0.46
TRIM56-204ENST00000487252 SLC8A1P32418 973 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 C9orf64Q5T6V5 341 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 MBLAC2Q68D91 279 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 RAB11FIP2Q7L804 512 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms