RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SCAMP4Q969E2 229 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 INTS12Q96CB8 462 aaKnown RBP5.74□□□□□ -1.49
COPS3-209ENST00000486810 SLC35A4Q96G79 324 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 MED30Q96HR3 178 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 HGH1Q9BTY7 390 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 SIL1Q9H173 461 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 VPS16Q9H269 839 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 XAB2Q9HCS7 855 aaKnown RBP5.74□□□□□ -1.49
COPS3-209ENST00000486810 RLIMQ9NVW2 624 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 ORC3Q9UBD5 711 aaPredicted RBP5.74□□□□□ -1.49
COPS3-209ENST00000486810 MTRF1LQ9UGC7 380 aaKnown RBP5.74□□□□□ -1.49
COPS3-209ENST00000486810 LAMP5Q9UJQ1 280 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 PYCARDQ9ULZ3 195 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 CAPN7Q9Y6W3 813 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.74□□□□□ -1.49
COPS3-209ENST00000486810 POLA1P09884 1462 aaPredicted RBP5.74□□□□□ -1.49
COPS3-209ENST00000486810 GAPVD1Q14C86 1478 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 SALL3Q9BXA9 1300 aa5.74□□□□□ -1.49
COPS3-209ENST00000486810 INSRP06213 1382 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SYNJ2BP-COX16A0A087WUM0 186 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 A0A1B0GVG6 124 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 A0A1W2PS29 197 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 LRRD1A4D1F6 860 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SPECC1L-ADORA2AF8WAN1 911 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 H3BML4 177 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 H3BUI4 141 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 RNF113AO15541 343 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 PFDN1O60925 122 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 TSC22D2O75157 780 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ERN1O75460 977 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 CSPG5O95196 566 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 APOEP02649 317 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 PCNAP12004 261 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 CPA3P15088 417 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 PORP16435 677 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 HDCP19113 662 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 RXRAP19793 462 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 M6PRP20645 277 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 PRKACBP22694 351 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 TGM1P22735 817 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ANXA13P27216 316 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 RPL9P32969 192 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 ASMTP46597 345 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 TUFMP49411 452 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 CCNG1P51959 295 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ZNF135P52742 658 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 MTTPP55157 894 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 POU6F2P78424 691 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 MRPS35P82673 323 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 ROR1Q01973 937 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ACTN3Q08043 901 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 TCF15Q12870 199 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 RIPK1Q13546 671 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 HABP2Q14520 560 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 IMMTQ16891 758 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 ARL13BQ3SXY8 428 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 CCDC40Q4G0X9 1142 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ZNF362Q5T0B9 420 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 RNASEH2BQ5TBB1 312 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 HECTD2Q5U5R9 776 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 GKAP1Q5VSY0 366 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 SNX30Q5VWJ9 437 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SIGIRRQ6IA17 410 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 PPP1R21Q6ZMI0 780 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 OVCH2Q7RTZ1 564 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SLC51BQ86UW2 128 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SLC44A2Q8IWA5 706 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 FAM186BQ8IYM0 893 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 TCEAL8Q8IYN2 117 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ZBTB34Q8NCN2 500 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 AFAP1L1Q8TED9 768 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ZNF606Q8WXB4 792 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ATL1Q8WXF7 558 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 NCSTNQ92542 709 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 PEX13Q92968 403 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 RBM18Q96H35 190 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 FAM167AQ96KS9 214 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 Q96MF0 132 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 NT5C1BQ96P26 610 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 NDNQ99608 321 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 GBA3Q9H227 469 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 CENPHQ9H3R5 247 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 CLSTN2Q9H4D0 955 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 C8orf33Q9H7E9 229 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 ARMT1Q9H993 441 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ACTR5Q9H9F9 607 aaPredicted RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 ARNT2Q9HBZ2 717 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ARFGAP3Q9NP61 516 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ALG13Q9NP73 1137 aaKnown RBP5.73□□□□□ -1.49
COPS3-209ENST00000486810 STARD7Q9NQZ5 370 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 INIPQ9NRY2 104 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ANO10Q9NW15 660 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 CFAP97Q9P2B7 532 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 ZDHHC8Q9ULC8 765 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 SNX8Q9Y5X2 465 aa5.73□□□□□ -1.49
COPS3-209ENST00000486810 FHAD1B1AJZ9 1412 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms