RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SEPT11Q9NVA2 429 aaKnown RBP18.26■□□□□ 0.51
COL6A1-204ENST00000486023 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 DCHS1Q96JQ0 3298 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 DNAH14Q0VDD8 3507 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 ABCA7Q8IZY2 2146 aa18.26■□□□□ 0.51
COL6A1-204ENST00000486023 EML5Q05BV3 1969 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 SLC30A4O14863 429 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 MOCS3O95396 460 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 CFIP05156 583 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 TFE3P19532 575 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 MATKP42679 507 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 CTSOP43234 321 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 IRX4P78413 519 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF33AQ06730 810 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 PTPRNQ16849 979 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 TRIM61Q5EBN2 209 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 PITRM1Q5JRX3 1037 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 STPG1Q5TH74 334 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 SND1Q7KZF4 910 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 KIAA0907Q7Z7F0 614 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 XYLT1Q86Y38 959 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 SLC30A5Q8TAD4 765 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 TOE1Q96GM8 510 aaKnown RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 HSPA12BQ96MM6 686 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 EDEM2Q9BV94 578 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 GPR174Q9BXC1 333 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 IRX2Q9BZI1 471 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 WDCPQ9H6R7 721 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 FSCN3Q9NQT6 498 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 KIAA1522Q9P206 1035 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-204ENST00000486023 VANGL2Q9ULK5 521 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 STAP1Q9ULZ2 295 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 SNX10Q9Y5X0 201 aa18.25■□□□□ 0.51
COL6A1-204ENST00000486023 MED19A0JLT2 244 aaPredicted RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 C4orf47A7E2U8 309 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 PAGE1O75459 146 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 PDGFRAP16234 1089 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CHRNB2P17787 502 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 MAOBP27338 520 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CD6P30203 668 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CDH5P33151 784 aaPredicted RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 MAPK8P45983 427 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 TPMTP51580 245 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 COPAP53621 1224 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CDR2Q01850 454 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CENPCQ03188 943 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 DEUP1Q05D60 604 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 ENPP2Q13822 863 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 AUHQ13825 339 aaKnown RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 RABGAP1LQ5R372 815 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 RNF219Q5W0B1 726 aaPredicted RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 SMYD5Q6GMV2 418 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 FBXL22Q6P050 247 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 APCDD1Q8J025 514 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 CCAR2Q8N163 923 aaKnown RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 IGSF8Q969P0 613 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 TBCBQ99426 244 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 TKTL2Q9H0I9 626 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 TMEM245Q9H330 911 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 ITM2CQ9NQX7 267 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 PIGVQ9NUD9 493 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 INTS6Q9UL03 887 aaKnown RBP18.24■□□□□ 0.51
COL6A1-204ENST00000486023 HS3ST4Q9Y661 456 aa18.24■□□□□ 0.51
COL6A1-204ENST00000486023 ADCY5O95622 1261 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 LSM8O95777 96 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 GABRB2P47870 512 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 JAM2P57087 298 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 NOMO3P69849 1222 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 EIF4EBP2Q13542 120 aaPredicted RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 UAP1L1Q3KQV9 507 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 C14orf80Q86SX3 495 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF677Q86XU0 584 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 SLC41A1Q8IVJ1 513 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 DHX40Q8IX18 779 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 EMC1Q8N766 993 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF397Q8NF99 534 aaPredicted RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 GANCQ8TET4 914 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 RPL10LQ96L21 214 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 NPY6RQ99463 290 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 METTL5Q9NRN9 209 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 SUN2Q9UH99 717 aa18.23■□□□□ 0.51
COL6A1-204ENST00000486023 NOCTQ9UK39 431 aaKnown RBP18.23■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 LNP1A1A4G5 178 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 SMTNL1A8MU46 457 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 TEX33O43247 280 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 MZF1P28698 734 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 FLT3P36888 993 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 ATP11AP98196 1134 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 FMO1Q01740 532 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF177Q13360 481 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 CAMK2GQ13555 558 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 SPDYCQ5MJ68 293 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 TTC17Q96AE7 1141 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 LMLNQ96KR4 655 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 CFAP57Q96MR6 1250 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms